| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3615 |
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| Symbol | |
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| ID | 5541117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4725483 |
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| End bp | 4726772 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895735 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_001433682 |
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| Protein GI | 156743553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.669923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACAC CGGCGCCGAC GCGCGGCGAT ACGTCCTGGT TCGTTCACGA CCGCTTCGGG
ATGTTCATTC ACTGGGGGTT GTACGCGCTC GCAGCACGCC ACGAGTGGGT CAAAAGCCGC
GAAAAGATCG ACGACGCATC CTATCAGCGC TATTTCGACC ATTTCGACCC TGACCTGTAC
GATCCGCGCG CCTGGGCGCG CGCTGCGCGT GAGGCGGGGA TGAAGTATGT GGTGATAACG
ACGAAACACC ACGAGGGGTT CTGTCTGTGG GATACGCAGT ACACCGATTA TAAGGCGCCC
AATACGCCGG CAAAGCGCGA TCTGCTGAAG CCGTTCGTCG AGGCGTTCCG CGCCGAAGGG
TTGCGTATCG GGTTTTACTA TTCGCTGATC GACTGGCATC ATCCCGATTT TCTTATCGAT
GTCTTTCATC CACTGCGCGA CCATCCAAAT GTCGCCCAAC TGAACGCCGG GCGCGATATG
CGGCGTTATG CTGCATATAT GCGCAATCAG GTGCGTGAGT TACTGACCGG CTATGGATCG
GTGGATATTA TCTGGTTCGA TTTTTCCTAC CCCAACCGCG AGTACAACGG CTTGCCCGGC
AAAGGGCGTG TCGATTGGGA AAGTGAAGCG CTGCTGCGCC TGGTGCGCGA CCTGGCGCCC
GACATTATTG TCAATAACCG CCTCGATCTG CCGACTGAGT TCGCCGATGT GCATACGCCT
GAGCAGTTTC AGCCGCGTGA GTGGGTCCAT GTCGATGGCG AGCCGGTGGT GTGGGAGACG
TGTCAGACGT TCAGCGGGTC GTGGGGGTAC CACCGTGATG AAATGACCTG GAAAAGCCCG
GAACAACTCA TTCAGATGCT GGTCAATTCC GTGGCATGCG GTGGCAACCT GCTGATGAAT
GTCGGTCCGA CGGCGCGTGG GACGTTCGAC GACCGCGCGC TTGCAGCCCT CAAGGTCTAT
GCCGACTGGA TGCGCTTGCA CAGCCGCTCA ATCTATGGTT GCACGCAGAG TGAGTTTACT
GCGCCGACCG ATTGCCGCTT CACGCAGAAT GGAAAGCGAC TCTACCTCCA CATTTTTTCC
TGGCCCTTCC GCCATCTGCA CCTTGATGGC ATGGCAGGCA GAGTGGAGTA TGCGCAACTC
CTCCATGATG CCAGCGAAGT TCGGCTGCTT GAACCGGGTA AGCACAATGA ATGGAGCATC
GCCCAAACTG CTGCCGATAC GCTCACCCTG GAGTTACCGG TGGTCAAGCC CCGTGTGACT
GTGCCGGTGG TGGAATTGTT CCTTCGGTGA
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| Protein sequence | MLTPAPTRGD TSWFVHDRFG MFIHWGLYAL AARHEWVKSR EKIDDASYQR YFDHFDPDLY
DPRAWARAAR EAGMKYVVIT TKHHEGFCLW DTQYTDYKAP NTPAKRDLLK PFVEAFRAEG
LRIGFYYSLI DWHHPDFLID VFHPLRDHPN VAQLNAGRDM RRYAAYMRNQ VRELLTGYGS
VDIIWFDFSY PNREYNGLPG KGRVDWESEA LLRLVRDLAP DIIVNNRLDL PTEFADVHTP
EQFQPREWVH VDGEPVVWET CQTFSGSWGY HRDEMTWKSP EQLIQMLVNS VACGGNLLMN
VGPTARGTFD DRALAALKVY ADWMRLHSRS IYGCTQSEFT APTDCRFTQN GKRLYLHIFS
WPFRHLHLDG MAGRVEYAQL LHDASEVRLL EPGKHNEWSI AQTAADTLTL ELPVVKPRVT
VPVVELFLR
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