| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3612 |
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| Symbol | |
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| ID | 5541114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4722552 |
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| End bp | 4723787 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640895732 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001433679 |
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| Protein GI | 156743550 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.423524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAA CGCCGTTGCC TGAGCCTTCC GCAACACCAA CCGCTACAGC GACACCGCTG
CCTTCGCCAA CGACTGCGCC GACCGCGCCG CCGCCTCCCA CGCTCACGCC TGCGCCGGAA
CCGTTGACGG TGTGGGCAGC AGGTGACGAA GCGCGACGTG ACGCCCTCGC GCGGCTGCTC
AGCGAAGCCG CCGCCGCAGC CAACGTGCCG ATCCGCATCC GTAGCAGCAC TCCCGACGCC
ATGATCGCCC GTCTGCGCGT CGATCAGATC GATGGACGGC CACCACCGGA TGTCATCTGG
GGTGATGGCA ACGATCTGGC GATCCTGCGC ACCATGGGGC TGATTCAGGC AGTGCGCTCG
ACGCCTGCCG CCGAGGGTAC GCTGCCGGCT GTCGTTGTGG GCGCAACCGC CGACGATCAG
CAGTGGGGCG TGCCGGTTGG CGCACAGGGT TTCTTGCTGC TGCTCTACAA CCGGAAACTT
GTCGAATATC CGCCGCGCAC CATCGACGCA CTGATCGCGG CTGCGCGCAC CAACACCGGC
GGAGGACGGT TCGGACTGGT TGCCGGGTGG ACTGAAGCGC GCTGGTTTGC GCTCTGGCTT
GACATAACAG GAGGCGCCAT GCTCGATGCC GACGGAATGC CCGCCCTCGA CGCTCCTGCT
GTTGTGTCTG CGCTCGAACT GCTGCGCACC CTCCGGCGGT ATGGACCAAC GCCCCCCTCG
ACCTACGATG AGGGCGCGCG ACTCTTCCGG CGCGGCAGGG TGGCGCTGGC AATCGATGGC
GATTGGGCGC TGGAAAGTTA TCGGGGATTG ACCGACACCC TGGAGTTAGG CATCGCGCCG
CTGCCGCTGG CGAATCGGGG CGTGCCGGCA GCCGCGCCGC TTACCGGCGT GTACTTGATG
TACGGCGCTG CGCTCGACGG TCAACGCCTG GCACAGGCAG AAACGCTGGC AGCGACCCTC
CGCGAACCGG TATGGCAGGC GCGCATCGCG CGCGACCTGA GCATGCTCCC GGCGTCCATT
CCCGCCTTGA ACGACCCGGC GGTCACTGAC GATCCGGCGC TGGCGGCAGC TGCAACGTAT
GCCGGCAATG CGCCGGGCAT CCCGCCGACC CGTCCGATTC GCTGCGCATG GGACGCCATC
GAAGTCGAAC TGCCGCCATT CCTGCTCGGC AGGCGCACCG CCGCCGAAAC CGCCACCGCC
ATGCAACGGC GGGCGATGGC GTGTGTGGAG CGGTAG
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| Protein sequence | MAPTPLPEPS ATPTATATPL PSPTTAPTAP PPPTLTPAPE PLTVWAAGDE ARRDALARLL
SEAAAAANVP IRIRSSTPDA MIARLRVDQI DGRPPPDVIW GDGNDLAILR TMGLIQAVRS
TPAAEGTLPA VVVGATADDQ QWGVPVGAQG FLLLLYNRKL VEYPPRTIDA LIAAARTNTG
GGRFGLVAGW TEARWFALWL DITGGAMLDA DGMPALDAPA VVSALELLRT LRRYGPTPPS
TYDEGARLFR RGRVALAIDG DWALESYRGL TDTLELGIAP LPLANRGVPA AAPLTGVYLM
YGAALDGQRL AQAETLAATL REPVWQARIA RDLSMLPASI PALNDPAVTD DPALAAAATY
AGNAPGIPPT RPIRCAWDAI EVELPPFLLG RRTAAETATA MQRRAMACVE R
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