Gene Rcas_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3578 
Symbol 
ID5541079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4670576 
End bp4670848 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content59% 
IMG OID640895697 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001433645 
Protein GI156743516 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.182494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.90179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGAG GGCGCATCAT TGTGGATACG GAACGCTGTA AAGGGTGCGG CTTGTGTGTC 
GCGTTTTGTC CGAAAGGCGT GGTGCATCTG GCGGCTGCGT TCAATGCCGC CGGTCATCAT
CCCGCACAGC TGGACGATCC CGACGGCAAA TGCACTGGAT GCACCATTTG CGCTCTGGTA
TGCCCCGAAG CGGCAATCAC CGTCTATCGC ACATTCTCCG TCAAAGCCAG CGTCACTGCT
GGCGGCGTGT GCGCTCTGGA AGCAACGTCG TAA
 
Protein sequence
MVRGRIIVDT ERCKGCGLCV AFCPKGVVHL AAAFNAAGHH PAQLDDPDGK CTGCTICALV 
CPEAAITVYR TFSVKASVTA GGVCALEATS