| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3562 |
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| Symbol | |
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| ID | 5541063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4650644 |
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| End bp | 4651603 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895681 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001433629 |
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| Protein GI | 156743500 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.843148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.300874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGC ATGATCGTAT CTCCGCCAAA GATATCCAGC GCGCACTGAT ATGGCGTATC
AGCAATGGCG TATACCATCC CGGCGAAGCG TTGCCGCCGG TGCGCAAACT GGCTGAAGAA
TTCGGCGCAA ACCGCAACAC AGTGAACAAA GCCTGCCAGG AATTGCGCAA ACTTGGCCTT
CTGGAAATGC GCGCCGACCG GCGCTCTCCC ATCGTTACGC GCATGGCAAC GACGGCGGCG
CCGCTTGAGC ACGTGCGGCA GCAGGCGCGC GACGTAGTGT GGCAGGCGAT GTCGGCAGGT
ATGACGCGCC AACAACTGCT CGCCGACATA ACCGCGCTGA TCGAAGAAGT GTACGGCGAA
AGCGATCTGA CGATCCGCTT CCTCGAGTGC AATTCCTACG ACAGCACGAC CCTGAGCCAT
GATCTGTCCC GCTTGACCGG TGTGCCGATC AGCGCAGGCT TGCTCGACGA ACTGCGCCAG
AATGTTGACG CATTCGCCCA GGCATACGAC CTGATCGTGA CGACTTTCCA TCATCTCGCC
GAGGTGTCAC AGGCGCTGGC ACAGTACCGG GACCGTGTGA TCGGCGTCGA TACGCGCCCC
TCGCCCGAGT CGTTGCTCCG CATTGCGCGG CTGACGAAGC CACGGATCGG ACTGGTGTGC
ACCCTGCCGG ATACTGCTCG TTCGCTGGAA TACACCATTC TGAGTTATCA ACCGACAGCG
CATGTCGTCA CCGCGCTGAT CGGCGCTCAC GATGATGTTC GTCGTCTGGC GCGCGGTTGC
GATCACCTGG TGGTGACGCA CAACTGCGTC CCTGCGCTCA CGGAATTGAC CGGTCGCCGA
CCCGACGTGG TGATCGAGTT CCGCATCGAT GACCAGTCTA TCGAGTATTT GAAAGAGCGC
ATTCGTGATG CTCGCCAAAG GGCAGCAATG GCGCCACGCG CCCAGGAGAG TGTTTCGTGA
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| Protein sequence | MAMHDRISAK DIQRALIWRI SNGVYHPGEA LPPVRKLAEE FGANRNTVNK ACQELRKLGL
LEMRADRRSP IVTRMATTAA PLEHVRQQAR DVVWQAMSAG MTRQQLLADI TALIEEVYGE
SDLTIRFLEC NSYDSTTLSH DLSRLTGVPI SAGLLDELRQ NVDAFAQAYD LIVTTFHHLA
EVSQALAQYR DRVIGVDTRP SPESLLRIAR LTKPRIGLVC TLPDTARSLE YTILSYQPTA
HVVTALIGAH DDVRRLARGC DHLVVTHNCV PALTELTGRR PDVVIEFRID DQSIEYLKER
IRDARQRAAM APRAQESVS
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