Gene Rcas_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3511 
Symbol 
ID5541010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4577896 
End bp4578711 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content56% 
IMG OID640895629 
Producthypothetical protein 
Protein accessionYP_001433579 
Protein GI156743450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAC AGACTGCGTC GGCCGGTGCG CCTCACTTTG TCGTCACCCA GATCGATCAC 
GCTCGGATGT CGGGCGAATT GGCTGCACTG TTCGGCAATG AACAATTTGC TCGCCCTGAA
CCGTGGGATT TGATCGTCTA CACGATTACT CATCATGATG AAGGATGGGC GGATGTCGAT
GCAGCCCCGG ATCGCGATCC GCACACCGGC CTCGTATATC ATCTGACCAA AACGCCGTTA
GACCGGCTCA TGATCACCAG TCAACAATCA CCGAATTTCA ATGAGCGCCA TCATCCTTTC
TGCGGCATTC TGTCAAGCAT GCACTCGTGG GGACTGTATA ACGGCCGCTA CGGGCTATCC
GATAAGATTT TCATCAATGC GATTGAGCCG GCGCAACGGC CTGCGGTGCA GGCGATGCTT
GACGCTGAAT TACGTCGCCA AGAGCGTTTG AAGCAGACCT TGCGCAGTAA TCCCGTTACT
GCGGCATGGG CTGAGGATGG TCGGCTGTTT TGGTCCTACA AACTGCTGCA ACTGTTCGAC
ACCCTGGCCC TCTTTTTTCA GACAACGCAT GCCGCAGCGC GTGTGCCAAC ACAGTTTCTC
CATGTTCCGG TTAACGGCGT GCGTGATACA ACGCTGACTG TCACACCGGT CGCATCTGAT
GTCGCTACTG TCGCGCCCTG GCCCTTCGCA ACAGCACAAG TAACTGTGTG TTGTCGCGGT
CGTCTGATGA CGCCACAGCC GGCCGACGTC GATGTCGCGG CGCTCTTTGC TTCATTGCCG
TTGACCGAGC AATGGTACAC GCTGATACCG GCATAA
 
Protein sequence
MIVQTASAGA PHFVVTQIDH ARMSGELAAL FGNEQFARPE PWDLIVYTIT HHDEGWADVD 
AAPDRDPHTG LVYHLTKTPL DRLMITSQQS PNFNERHHPF CGILSSMHSW GLYNGRYGLS
DKIFINAIEP AQRPAVQAML DAELRRQERL KQTLRSNPVT AAWAEDGRLF WSYKLLQLFD
TLALFFQTTH AAARVPTQFL HVPVNGVRDT TLTVTPVASD VATVAPWPFA TAQVTVCCRG
RLMTPQPADV DVAALFASLP LTEQWYTLIP A