Gene Rcas_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3466 
Symbol 
ID5540965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4526068 
End bp4526871 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content61% 
IMG OID640895584 
Productacetylglutamate/acetylaminoadipate kinase 
Protein accessionYP_001433534 
Protein GI156743405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.038879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTGG TCAAAGTTGG CGGCGGCGCC GGCATTGCCT ACGATGCGCT CTGCGCCGAT 
CTTGCAACCC TTACGCGCGC CGGTCAGCGG CTCGTGCTGG TGCATGGCGG CTCGCACGAA
ACCAATACCC TCGCCGAACG ATTAGGACAT CCGCCGCGTT TCGTCACCTC GCCGTCCGGT
TATACCAGTC GCTATACCGA CCGCGCGACG CTGGAACTCT TTCTGATGGC AACCGCCGGT
AAGGTCAATA AGGTGATTGT CGAGCGCCTG CAACACCTCG GAGTAAACGC AATCGGTCTT
TCCGGTCTCG ATGGGCGTTT GCTCGAAGGG CAACGCAAGG CGGTCATCCG CATTGTCGAA
GATGGCAAAC AAAAGGTGCT GCGCGACGAC TGGACCGGGA CGGTCGAGAA AGTCAATACC
CACCTGCTGA CCCTGCTGCT GAACGCCGGG TTCTTGCCGG TGATCGCTCC AATTGCTGCC
AGTGACGCTG GCGAAGCGCT CAACGTCGAT GGCGACCGAG CGGCTGCGGC AATTGCGGCG
GCGCTCGGCG CCAATACGTT GATCCTGCTG ACCAATGTTC CTGGTTTGCT GCGTGCCTTT
CCCGACGAAA GCACCCTCGT CCGGCACATT CCGCGCGCTG ACATTGAGGA ATATCTGCCG
CTGGCACAGG GACGGATGAA GAAAAAAATC CTGGGTGCGT CCGAGGCGCT GGCGCAAGGA
GTAGGACGGG TTATCCTCGG CGATGCGCGT GTCGCCGAAC CGATCACGCG CGCGCTTGCA
GGCGAAGGCA CCGTCATCGT ATGA
 
Protein sequence
MIVVKVGGGA GIAYDALCAD LATLTRAGQR LVLVHGGSHE TNTLAERLGH PPRFVTSPSG 
YTSRYTDRAT LELFLMATAG KVNKVIVERL QHLGVNAIGL SGLDGRLLEG QRKAVIRIVE
DGKQKVLRDD WTGTVEKVNT HLLTLLLNAG FLPVIAPIAA SDAGEALNVD GDRAAAAIAA
ALGANTLILL TNVPGLLRAF PDESTLVRHI PRADIEEYLP LAQGRMKKKI LGASEALAQG
VGRVILGDAR VAEPITRALA GEGTVIV