| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3460 |
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| Symbol | |
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| ID | 5540959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4519026 |
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| End bp | 4520192 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895578 |
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| Product | acetylornithine and succinylornithine aminotransferase |
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| Protein accession | YP_001433528 |
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| Protein GI | 156743399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00640133 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATCGA TACGTGAGTC TATCATATCC ACCGAGTCTG CGTATACATC CGGCGTTTAT
CCCAAGCGGC AGGCGGCGAT TGTGCGTGGT GAAGGTGCGC TCCTCTGGGA TGCCGATGGT
CGTGTGTACA TCGATTGCGT CGGCGGGCAG GGCGCCGCCA ACCTGGGGCA CGCTCATCCC
GCCGTGGTCG CGGCTATCCG CGAACAGGCA GAGCGCCTGA TCAGTTGCCC GGAGATTTTC
TACAACGACC AGCGCGCCGC CTATCTCGCC GAACTCGCCG CTGCGCTCCC TTTCGCCGCC
AGAATCTTCC TGTGCAATTC AGGCGCGGAG GCAATCGAAG GCGCAATTAA AATCGCGCGC
TTGAAAACCG GGCGCACCGG GATTGTCGCG GCAGTGCGCG GTTTCCATGG TCGCACCATG
GGCGCGCTCT CCGCCACGTT CGAGCCGAAG TACCGCGAGC CGTTCATGCC GCTCGTGCCC
GACTTTACGC ACGTGCCGTA CAACAATGTC ACGGCGCTCG ATGCAGCAGT CACCGACCGC
ACCGCAGCCG TTATCCTGGA ACCGGTGCAG GGCGAAGGCG GCGTCCATCC CGCTGCGCCA
GGCTACCTTG CGGATGTCGA GCGGATCTGC TGCGAACGTG GCGCGCTCTT GATCATCGAC
GAAGTGCAGA CCGGCTTCGG GCGGACGGGG ACGCTGTTCG CCATCGAACG TCACGGGATT
ACACCCGCAA TCCTCTGCCT GGCGAAGTCG ATCGCTGGCG GATTACCGAT GGGCGCCATC
GCTATCAATA CTACCCTCGG ACCGTTGCCG CCGGGTAGCC ACGGAACGAC CTTCGGCGGA
TCGCCGCTGG TCTGCGCTGC CGCCCGCGCC GCGCTGCGCG CCATACGCGA CGAGGAGTTG
CCGCGCCAGG CTGCCGAAAA AGGCGCCTAT GCTCTCGAAC GCCTGGCGGC GCTGCGCCTT
CCGCGTATTC GCGCGGTTCG CGGGCAAGGA CTGCTGATCG GCATCGAATT GAAAGAGCGG
GTGCAACCAT TTCTGGTTGC GCTGATGGAG CGCGGTGTGC TGGCGTTGCC CGCCGGTCCG
AATGTGCTAC GGTTATTGCC TCCGCTCGTT ATCACCTGCG AGCAGATCGA CACGGTCGTT
GCCGCGATTG CTGAGGTGCT GGCATGA
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| Protein sequence | MQSIRESIIS TESAYTSGVY PKRQAAIVRG EGALLWDADG RVYIDCVGGQ GAANLGHAHP
AVVAAIREQA ERLISCPEIF YNDQRAAYLA ELAAALPFAA RIFLCNSGAE AIEGAIKIAR
LKTGRTGIVA AVRGFHGRTM GALSATFEPK YREPFMPLVP DFTHVPYNNV TALDAAVTDR
TAAVILEPVQ GEGGVHPAAP GYLADVERIC CERGALLIID EVQTGFGRTG TLFAIERHGI
TPAILCLAKS IAGGLPMGAI AINTTLGPLP PGSHGTTFGG SPLVCAAARA ALRAIRDEEL
PRQAAEKGAY ALERLAALRL PRIRAVRGQG LLIGIELKER VQPFLVALME RGVLALPAGP
NVLRLLPPLV ITCEQIDTVV AAIAEVLA
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