Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3456 |
Symbol | |
ID | 5540955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4515922 |
End bp | 4516245 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640895574 |
Product | hypothetical protein |
Protein accession | YP_001433524 |
Protein GI | 156743395 |
COG category | [S] Function unknown |
COG ID | [COG3254] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.022732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG TCGGTTTCAC CCTCAAAGTC AAGCCGGAAC TCATCGACGA GTACAAAGCC CATCATGCGA ACGTCTGGCC CGAGATGCTC GACGCGCTGC GACGGCACGG CTGGCGGAAC TACACCCTCT TTATACGCCA TGACGGGCTG CTCTTCGGGT ACGTGGAAGT GCCCGAGAGT TTCGAGAAGG CGCTGGCAGG CATGGCGACG GAAGAGGTCA ATGCGCGCTG GCAGGCGATG ATGGCGCCAT ACTTCGAGAA CCTGAGCGGC GCCTATGCCG ATCAGAGCAT GGTCGAATTG GAAGAAGTTT TCCATTTGGA TTAA
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Protein sequence | MKRVGFTLKV KPELIDEYKA HHANVWPEML DALRRHGWRN YTLFIRHDGL LFGYVEVPES FEKALAGMAT EEVNARWQAM MAPYFENLSG AYADQSMVEL EEVFHLD
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