| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3434 |
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| Symbol | |
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| ID | 5540933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4480215 |
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| End bp | 4482467 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895552 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001433502 |
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| Protein GI | 156743373 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.364699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.15182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCA TCTTTTCCCC TGCTCGTTCC CTGAGCATCC GATTGGGGCT GTTCACCATT
GCCACTGCGC TGATGGCAAT GATAGCGCTG ACCCTGTTGA CCAACCGGGT TGCCACCGAA
AACGCCATTG CGACGGCGCA GCGCGAGATT GATGCTCAGA CCCTCAATGG CATCGAGCGC
ATCGAGATGT ATCTCCAGGA TCGGCGATCC GGCGTGGCGC TGACAGCGCA GCTGCCACTC
GTGCGTCTCA TGCTTGCGAA TCAGGATGAC CCCGAAGCGC GCGAGCGAGG ACAATCCGTG
ATCAACGCCG TCCAGAGCAC CTTCAACTAC GACTCCATGT CGCTGCTGAA TGTCGCCGGA
CAGACACTGA TTAGCACCAA TCCGACACTG CCTGGACAGG ATCGCAGTCA GCGACCGGAA
GTCATCAGTG CGCAGCGCGG TGCGTTGGGG ATGTCGGATG CAACGACCGA TCCGAATGAC
GATCAAGTCT ATCTCCATTT CACGGCGCCC GTGTATGGAT CGAACAATCA GATGATCGGC
ATTGTCGATG GTCGTGTTCG GCTCGATGAG ATTCACCGCC TGGTGGCGCT TGACGCGAAT
CGCAGCGGCA CGGGCAGTTA TAGCGTGATT GTGGACGCTC ATGGCATTCG TCTCTCAGTC
CCGAACTTTC CGCATCTGCT CTTTCACCCA TCGGCGCCGC TGGCGCCAAC AGTTGCGCAG
AAAATGATCG ACGCCCGTCG TTTTGGCGAC AACACGGCCA CACTGCTGCA ACAAGCCTCT
TCGATGCCCG AAGTTCTCGA AAGTATCGAT CTCCTGAACC GACACGTCGA CGAGAGTCGC
TTTTTCACCG GCACGCTCAA TTCCGGCGAG GAGGGGGAAT CGGTCATCCG CAAATTGCGC
TCGGTAGACT GGTACTACAT CCATCGTGTG CCGATTGAAC AGTTCTACAG CGTGGTGCGC
AGTCAAACCG GTTATGCCCT GCTGATCACC GCCATTGCTG CATCTCTCGC CATTGCGGTC
ACGCTCTGGT TTGTGAACAA CTCCCTGCGC CGACCATTGC TCCAACTGAT CGAGACCGCG
AGCGTCATTG CGGGAGGCGA TCTGCGCAAG CGTCTCCACA TGCAACGGCG CGACGAAATC
GGTATTCTTG CCCACACTTT CGACGCCATG GCGGATGCGC TGGAAGCGCG CATCAACGAA
GCGCAGGCTG CGCAGGCGGA AGCGCAGCGC CTCCAGCGCA TCGAAGCCGA AGGACGCGCA
TCGCTCGAAC GGAGCGTCGC CGAATACCTG GCGTTTGTGC AGCGTGTGGC GAACGGCGAC
CTCTCACAGT CGCTCCACAT TGATCGCGGT GACGCTCTGG GTCAGTTAGG CGAAGGTCTC
AACCATATGG TCGAAAGCCT GCGTGCTATG GGGCGGCGAT CGCAAGAGGC TGCCAGCGCC
ATCGCCGCCG CTGCTGCGCA AATCCTGGCG ACGACCACGC AACAGGCATC GGCAGCCAAC
GAACAATCAA CCGCTGTTGC CCAAACCATG GCGGCGCTTG ATGAGGTGCG CGCGATTGCG
CGGCAAACCG CCGACCAGGC GGACCATATC GCGCGTGATG CTCAGGCAGC GCTTACGGTC
GCCCAACAGG GGATCGCAGT CGTCGAAGAA ACGGTGCAGA GCATGACCGA CATTCGCCGG
AGGGTCGAAG GCATTGCGCA AACCATTCTG TCGCTTGCCG ATCAGGCACA GGCGATCAGC
GCCATTACCA GCGTTGTCTC TGAACTCGCC GATCAATCGA ACCTGCTTGC CCTCAACGCT
GCCATCGAAG CGGCGCGCGC CGGCGAGCAT GGAAGAAGTT TCTCAATTGT CGCCCAACAG
GTGCGCGATC TGGCAGAACG CAGCAAGCAG GCGACGGTGC AGGTTCGTTC CATCCTGGGA
GACATTCAAA AGTCAACCAA TACCGCTGTG GTGGTGACCG AAGAAGGCGC GAAACGTGTG
GATTCCGGCA GTCAACTGGT GAGTCAGGCA GGTGATGTGA TCCATCGTAT TGCTGGCGAA
GTCGAGACCG GCGCGCAGGT CAATGTGCAG ATGGCTGCCA GCGCCCGGCA GGCAACCGCC
GGACTTGACC AGATCGGGCA GGCGCTGACG TCCATCCAGA AGGCGGCAAG CGAGACGCTG
GCAAGCACGC GCCAGGCTGA GCGTGCTGCG CAAGACCTGA ACACGCTGGC GCAATCGCTT
CAGCAGATGG TGGCGGTATA TCGCCTGGCA TGA
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| Protein sequence | MLSIFSPARS LSIRLGLFTI ATALMAMIAL TLLTNRVATE NAIATAQREI DAQTLNGIER
IEMYLQDRRS GVALTAQLPL VRLMLANQDD PEARERGQSV INAVQSTFNY DSMSLLNVAG
QTLISTNPTL PGQDRSQRPE VISAQRGALG MSDATTDPND DQVYLHFTAP VYGSNNQMIG
IVDGRVRLDE IHRLVALDAN RSGTGSYSVI VDAHGIRLSV PNFPHLLFHP SAPLAPTVAQ
KMIDARRFGD NTATLLQQAS SMPEVLESID LLNRHVDESR FFTGTLNSGE EGESVIRKLR
SVDWYYIHRV PIEQFYSVVR SQTGYALLIT AIAASLAIAV TLWFVNNSLR RPLLQLIETA
SVIAGGDLRK RLHMQRRDEI GILAHTFDAM ADALEARINE AQAAQAEAQR LQRIEAEGRA
SLERSVAEYL AFVQRVANGD LSQSLHIDRG DALGQLGEGL NHMVESLRAM GRRSQEAASA
IAAAAAQILA TTTQQASAAN EQSTAVAQTM AALDEVRAIA RQTADQADHI ARDAQAALTV
AQQGIAVVEE TVQSMTDIRR RVEGIAQTIL SLADQAQAIS AITSVVSELA DQSNLLALNA
AIEAARAGEH GRSFSIVAQQ VRDLAERSKQ ATVQVRSILG DIQKSTNTAV VVTEEGAKRV
DSGSQLVSQA GDVIHRIAGE VETGAQVNVQ MAASARQATA GLDQIGQALT SIQKAASETL
ASTRQAERAA QDLNTLAQSL QQMVAVYRLA
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