12 homologs were found in PanDaTox collection
for query gene Rcas_3352 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3352  hypothetical protein  100 
 
 
123 aa  239  1e-62  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4062  hypothetical protein  86.99 
 
 
121 aa  206  1e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2432  hypothetical protein  49.18 
 
 
121 aa  109  1.0000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.304675  normal 
 
 
-
 
NC_009972  Haur_3222  hypothetical protein  47.93 
 
 
120 aa  107  7.000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.01207  n/a   
 
 
-
 
NC_009455  DehaBAV1_0561  hypothetical protein  28.8 
 
 
140 aa  50.4  0.000009  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00605837  n/a   
 
 
-
 
NC_013552  DhcVS_526  hypothetical protein  31.75 
 
 
140 aa  50.1  0.000009  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00000558785  n/a   
 
 
-
 
NC_002936  DET0587  hypothetical protein  30.95 
 
 
140 aa  48.9  0.00002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_06880  hypothetical protein  29.82 
 
 
124 aa  48.9  0.00002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2130  hypothetical protein  36.92 
 
 
430 aa  44.3  0.0005  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0384361  n/a   
 
 
-
 
NC_014212  Mesil_2642  hypothetical protein  26.81 
 
 
137 aa  44.3  0.0006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.660176  normal 
 
 
-
 
NC_011661  Dtur_0735  hypothetical protein  30.67 
 
 
116 aa  41.6  0.004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1214  hypothetical protein  34.78 
 
 
143 aa  41.2  0.005  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.0000175016  normal  0.800065 
 
 
-
 
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