| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3348 |
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| Symbol | |
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| ID | 5540847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4369623 |
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| End bp | 4371668 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895466 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001433416 |
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| Protein GI | 156743287 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAC GCCGTTCACT CCTGGCGCTG ATTCTGATAG TGGCGCCTGT ATTCCTTCTG
ACCGTGAGCA ACCCACCGGT ACGCGCGAAT GTGGCACACC CCTTATCCGG CGCATCGGTC
TATCTCCCGT TCGTCACGCG ACCCGCAGCG GTCGATCTGG TGCTCAACCA GGTTGAGATC
ACCCAATCAG TACAGAACGG CAGCAACAGC GTGCCGCTGG TTGCCGGGCG CGCGACTGTG
GCGCGGGTGT ACGTGACCGT ATCCGGCGTC GCAGAACTTT CGAACGTGAT CGTTGAAGTC
TCTGCAACGC ACGGCGGTGT GTCGCTACCC GGTTCGCCGC GTCGCTCCAA CCCGCGCACG
GTCACAACGA GCGCCTCGCG CGGGAACTAC GCCAGCAGTT TCAATATCGC CCTTCCGTCC
GAATGGCTGT CGGGCAACGT ACACCTTACG ATCGTCGTCG ATCCCGACAA CCGGGTCGCA
GAATCGAATG AATTGAACAA TCGCCTGACG CGCGCGCTAG AGTTCCTGGC GGCGCCGCCG
CTTGATCTGA CAATTGTGCC GATCCTGTAC ACCCATACGC CGAATGGTCG CACCTACCCG
GCGCCAACGC GCGACACCGT CAGCGACTGG ATCATGCGCG CCTACCCGAT CAGTGGCATC
ACAGTACGGC TGCGTGCGCC GATATCATTC ACCGGCGACC TGCGGAGCGG CGATGAATGG
GAGCGGCTCC TCGACATGAT CACATCGGTC TGGCGGAGTG ATGGAGCGCC ATCATCACGA
GTGTACTATG GTCTGATACC AATCGCAAAC GGCAATGACC GCTGGTTCAG TAGCGGTATC
GCAGGCATCG GTTGGATTGG GTTGCGCACA TCGCTCGGGC TTGATCTGAC AAGCCCTGCC
GATGCTGCCA GTCAACTGGC AGCCCACGAG ATCGGGCACA ACCTGGGGCG CTACCATGCG
CCATGCGGCG TGAGTGGCGA TCCCCGGCAG CCATTTCCCT ATGCGGATGG GTCGATTGGA
CCAGACGTGT ATGGTCTGGA CATCAGCCGC GCGCGTGTCT GGAGTTCAGC GGCGCCGGAC
AACACGAGGG ACTTGATGAG TTACTGCCGA CCGCAGTGGG TTTCGGATTT CACTTACCAG
GGGTTGTTGA ACAATCAGCG CATCTACGGC GCTGGCGTCG CGCAGACCGG ATCGGGGCTG
CTGGTGCGCG CAAAGATTGC AGCAGATGGC GCAACAGCGC TGGAACCGGT GTATGCGCTC
GACCACATCA CCATGGACGC ACCGCAGTCT GGCGAGTATA CTATCGAATT GCTGGACGCT
GCCGGAACTG TCCTTGACAC CCACGCCACC GCCGCCGTCG AGGTCGAGGG ACTATACCAT
TACGATGAGG ATCTGATGCA CCACGATCAC GACCACATCC ATCGTTCGAT CATTGCCGTC
GTGCCGACGC CGGCGGGAAC AGTGGCGCGG GTGCGCCTGA AACACAATGG CACGGTCGTT
GCGGAGCAGG CAACCGGCAA GGTTGTCGCG CCAACGGCAG TCGCATCGGC CACACTCACT
CAGGAGGGCG CAACCCGGGT TCTTTCCTGG TCGAACGCGG CTACACCGAC GTTGGTGCGC
TACACGCACG ATGGCATCCA CTGGACGACC CTCGGCATCG ATCTGGTCGG CGGGAGGTTG
ATCATCGAGC CGGACGCGCT TCCAGGCGGC GGGCAGGGAC GGTTCGAGGT CGTGCAATCC
GGCGGCGCCA CGCTCACCAT CGACGGAGCG ACTGGAATGG CTGCATCCGA TGCGCCGCCG
CAGGTATGGA TCGATGGTCC TGCAACACTA CCGGTTGGTG CGCCGCTCCT CCTCTATGGG
CGAGCCTCGG ATCGTGAGGA TGGCGCGCTT GACGATCTCA CCTGGCATAT CAGCGGCGCG
CCTGTGGGCG CAGGGCAGAC GTTGGTGCTA GACCATCCTG CGCCGGGCAT GCATCGTATC
CGCCTGACCG CACGCGACGC TGCGGGAAAT GCAACGGTCG CAGAGCATTA CGTCTTTGTC
GAGTAG
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| Protein sequence | MHPRRSLLAL ILIVAPVFLL TVSNPPVRAN VAHPLSGASV YLPFVTRPAA VDLVLNQVEI
TQSVQNGSNS VPLVAGRATV ARVYVTVSGV AELSNVIVEV SATHGGVSLP GSPRRSNPRT
VTTSASRGNY ASSFNIALPS EWLSGNVHLT IVVDPDNRVA ESNELNNRLT RALEFLAAPP
LDLTIVPILY THTPNGRTYP APTRDTVSDW IMRAYPISGI TVRLRAPISF TGDLRSGDEW
ERLLDMITSV WRSDGAPSSR VYYGLIPIAN GNDRWFSSGI AGIGWIGLRT SLGLDLTSPA
DAASQLAAHE IGHNLGRYHA PCGVSGDPRQ PFPYADGSIG PDVYGLDISR ARVWSSAAPD
NTRDLMSYCR PQWVSDFTYQ GLLNNQRIYG AGVAQTGSGL LVRAKIAADG ATALEPVYAL
DHITMDAPQS GEYTIELLDA AGTVLDTHAT AAVEVEGLYH YDEDLMHHDH DHIHRSIIAV
VPTPAGTVAR VRLKHNGTVV AEQATGKVVA PTAVASATLT QEGATRVLSW SNAATPTLVR
YTHDGIHWTT LGIDLVGGRL IIEPDALPGG GQGRFEVVQS GGATLTIDGA TGMAASDAPP
QVWIDGPATL PVGAPLLLYG RASDREDGAL DDLTWHISGA PVGAGQTLVL DHPAPGMHRI
RLTARDAAGN ATVAEHYVFV E
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