| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3293 |
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| Symbol | |
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| ID | 5540791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4279315 |
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| End bp | 4281645 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895411 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433362 |
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| Protein GI | 156743233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02674] CRISPR-associated RAMP protein, Csx10 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.642367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.855999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCC GTCTCGAATT CGAGATCGAG TTCAAAAGCG ATTACCACAT CGGCGCCGGT
TATGGTCTCG GTCTGCAAGT TGACTCGGTC CTACTCCGCG ACGCCGACGG CGTACCGGTA
ATCCGCGGCA CGGTGCTGGC CGGTCTCCTG CGCGAAAGTT TAACCACTCT GCTGACACTG
CAAGTGTTTG CGTCCGATCA ACATGTAGTG GATACGATCT TCGGTTCGCT CGCCCGCCAA
AAGCGTTGGC GTATCTCTTC TGCACGACCT GCGGGTATGA TGACACCGCT CGTGCCATCG
GACGTGTGGA GTGCGGGCAA AACGGCGGCG CAGATTACAA CGCGCGTGCG GGTCAATCCT
CGCACACGTC GGGCCGAGAA AAATAAACTG TTCACCCGTG AGGAGGGTGA TGGCAGCTTG
CGCTTCCGCT TCGTGGCCGA GTGCCAGAAT GATGATGCCG ATGCGCAGCG CGAGGCTGAA
TGGCTCGTCG CCGCTGCACG CATGCTGCGT AATCTTGGCG CCGGCAAGCG TCGTGGCTAT
GGTGAGTGCG AGATTCATCT TGTTGATCGA GCGCAGGAAA CCGCATTTCT GGATCGATTG
GCCAGGCGGT TAAGAGGTGA ACATGGCGCA GAACCTGCCT TGCCTGCCGG TGCAATCAAC
ATCAGGCCGC TTCCGTTGCC CCCCAATCCC AACCATCATA CCTATCGCTT GCGCGTTCTC
ATGCGGCTTG ACGAACCGTT ACTGATCGCT CGTCGGGTCG AAGCCGGTAA TCAGTACGAG
ACGCTCGACA TCATTCCCGG CAGTGTGCTG CGCGGCGCGC TGGCGTGGCG TGCGGCGAAG
CGTCTGGGAC AGCAACTTCA GGGGTCGGTA TACCAGGATT TTGTCAATCT GTTCTGGCGG
GATACGGTGC GTTTCTCGAT GTTGACTCCG GTAGAAGTGT CTCGGCAAGC TAGTGGTTAT
CCCACCATAA TTGCCCCGCG CGATCTGCTA ACGTGTGAAT TGCATCCGGG TTTTACTAAG
CCCAGCGAGG ACGATGGATG CGGCGTTTGG AGCAGGTTCG AGTCAGTGTC AGAGACCTGT
CCGGTATGTG TCACAGATCA TGGGGCGGCG AAACTGGAAA CGCTCGGTGG CTTCATTTCA
CTGGTCAGAA ATATGCCGCG TTCCAGGCAC AAACCGTCCA CGATGGTGGA AATGCATATT
CGCATCGATC CTGACAGTGG TCGGGTGCGC ACCGGCGATC TGTACGGGTA CGTAGCTTTA
GAGCCGGGTC AGTATTTTGT CGGTGAGGTA ACCTGTACGG ATGCGAACAT CTGGGACGCG
CTGCGAACGA TGGCCAATCT TCAACCAAAT GGTGCGGTAA ACGAACTGCA CCTCGGTAAA
GCCACCCAAC GCGGCTATGG TAAAGTCAGC GCCGTGTTTC AGAAAATCGA CGAACCGCTG
TTCAGCTTGC AGTCACTCAC AGAACGCCTC ACGTCAACGG AGCATGTCAC GATGCTATTG
TTGAGTGATG CGATTATCGT CGATCCGTGG GGACGTTTCT GGCGTGGGTT CGATGCCGCA
TGGCTAAAGC GCGAGTTGCA GTTGCCGAAT GGCGCAGCAG TCTCGATTGA TTGCAACCAG
AATGGCGAGG CGCTGGCGTT TTCAGCGGTG CGGACGGTGG ACTCCTTCAA TGCCACGTTA
GGTTTGCCGC GCGCGCGAGA TATTGCCATC GTTGCCGGTT CCAGTGTACG CCTGAGTTTC
AAGGGAATCC CGTTGGATGA CCTGCGACAG CGTCTGGGGG AGGTAGAGGC GCAGGGTATC
GGTCTCCGCC GCAATGAGGG CTTCGGTTGT GTTGCGTTCA ATCATCCGGT CTACCGTCAA
CTTCAAGGGA TCACCAGTCC GATGCTCGAT CTCACCCCGT TGCAGATGGC GTCTGCCGAG
CAGTCGCCCC CGTTTGTGGC CGTGCTTGCT TTCACCCGCG AGTGGGAGGA AAAGCTCGAA
GCGGAAGCAA CATCCTTCGC TTGTTTCAAC GATGGGCGTT TTGAGACGAT TGCTCGGCTG
TTACATGTTT CTCAGCACAC CTCGGTTGAT GCCATCAAGC AGGATTTACA ACGGTCAGGG
AATGCAGAGA ACCTCCTCGG CAAATCGTTG TCCGGCCGCG ACAAACCGAA TTTCTTCACG
GCTGACGGGA AGCGCGGTAT GGATGTGATC GATAAGCTGC TGGATGCGTT GGTAGACGAA
CTCAAGCAAC ACAAGTTGGA CCACAATCCG CAGGCATGGC GCATAGGTTT GCAGATGCTG
GCTGCCCGGA TCGCTGCGCC TGCCCGCCAG AAGGCTGAAG AGAGGAGATA G
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| Protein sequence | MSIRLEFEIE FKSDYHIGAG YGLGLQVDSV LLRDADGVPV IRGTVLAGLL RESLTTLLTL
QVFASDQHVV DTIFGSLARQ KRWRISSARP AGMMTPLVPS DVWSAGKTAA QITTRVRVNP
RTRRAEKNKL FTREEGDGSL RFRFVAECQN DDADAQREAE WLVAAARMLR NLGAGKRRGY
GECEIHLVDR AQETAFLDRL ARRLRGEHGA EPALPAGAIN IRPLPLPPNP NHHTYRLRVL
MRLDEPLLIA RRVEAGNQYE TLDIIPGSVL RGALAWRAAK RLGQQLQGSV YQDFVNLFWR
DTVRFSMLTP VEVSRQASGY PTIIAPRDLL TCELHPGFTK PSEDDGCGVW SRFESVSETC
PVCVTDHGAA KLETLGGFIS LVRNMPRSRH KPSTMVEMHI RIDPDSGRVR TGDLYGYVAL
EPGQYFVGEV TCTDANIWDA LRTMANLQPN GAVNELHLGK ATQRGYGKVS AVFQKIDEPL
FSLQSLTERL TSTEHVTMLL LSDAIIVDPW GRFWRGFDAA WLKRELQLPN GAAVSIDCNQ
NGEALAFSAV RTVDSFNATL GLPRARDIAI VAGSSVRLSF KGIPLDDLRQ RLGEVEAQGI
GLRRNEGFGC VAFNHPVYRQ LQGITSPMLD LTPLQMASAE QSPPFVAVLA FTREWEEKLE
AEATSFACFN DGRFETIARL LHVSQHTSVD AIKQDLQRSG NAENLLGKSL SGRDKPNFFT
ADGKRGMDVI DKLLDALVDE LKQHKLDHNP QAWRIGLQML AARIAAPARQ KAEERR
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