| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3292 |
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| Symbol | |
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| ID | 5540790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4277443 |
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| End bp | 4279311 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895410 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433361 |
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| Protein GI | 156743232 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.798448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC GTGCCATCAC TGCCAAGCTA ACGCTGCGTA CAGCGCTTCA CGTAGGCACG
GGCAGCGATA CGGAAACGAC CGACGATCTC TTGCGCCGTG ATGTGCGGGG GCGGCTGCTC
ATACCGGGTA CCGCTATCGC CGGTGCGTTG CGCAGCATTG CCACGCGGCT CGCGCCTCGC
TTTGGGGGAA GTCCGTGTCA AGCGATTAAC AACCAATCGT CAAGCGCTGC CTGTCAATGT
CTTGTCTGCC AGCTCTTCGG CGATGTGAAT CCAAGGGAAG ATAGTGATAC CGCCACTGCT
GCCCGGCTGC TGGTCTACGA TGCCGTGCTC GATACGATCC CATCGCTGAC CATCCGCGAT
GGCGTTGGGA TTGATCGGGT GACCGGCGCA GCAGCGCGCC GCGAACGGAT TAAGTTCGAT
TACGAAGTGT TGCCGGCAGG GACGGTGTTT AAGCTACGGC TTGAGATCGA TCCTAAACTG
CCTGATGAGC CGAAACTGCT GCCCTTGTTG GCGGCGACGT TGGCCGAATG GGAACAGGGA
CGAGGCGCAA TCGGTGGTCG GGTCAATCGT GGGTTGGGTG CGTTTACCCT CAACGAGGTG
CAATGGATCG AGCGCGATCT GAATCAGGCA AAGGTGCTGA TCGAGTTTTT ACACCACGGG
CCGCCTTGGC ACACTACTGA CGGCGACCGC ACATGGCTGA CCAATCAGGT CCAGCAGGTG
CGGGCGTGGG TAGAACCGTA CCAGGGTAAT GATCCGGTTG CCCGTTCATG GGTTTTGGCC
GAATTTACAC TGGCCGCAAC CGGTCCCTTT CTGACCAACG ATGTGGCTCA AGCCGGTCGG
AGCGGGTTTG ATCATGCGCC CGTGTTCGCG GCTTATGAGC AAGGGGCTAA GCCGGTGTTG
CCCGGTTCGA GCCTGCGCGG CGCCTTGCGG AGTCAGGCCG AGCGGATCGC TCGCACTCTC
GCGACTTTCA GCGCGTGGGA TAACGGTAAG AATATGGGGA GTCGCAAAAC GGCATTCTTA
ACGACATGCC CCGCCTGTAA TCCGCTGACG ACCAAGACTG ATGACCCGGT TGCAAGTTGT
AACAGCTTTA TCAAGGCTCT ACTAAAGGTT GAACGGCAAT CGCAGAAGAA CTTCTGCGGC
GCGGTGTTGT CGAGTAACAG CTTTATCAAG GCTCTACTAA AGGTTGAACG AGATACGTTT
GAGCAAAAAG GGGCTGAGGA GAAACTCTGT CTCGCCTGCC GGCTTTTCGG CAGCCCGTGG
AACGGCAGCC GGTTGCGCGT CGAAGATGCA CCGTTTGTCG GCGACAAGGT TACTCTCAAG
GTGCTCGATT TTCTGGCTAT CGACCGCTTT ACCGGCGGCG GACGCGATAC GGCCAAGTTC
GACGCGGTGG TGCTGTGGCA GCCTAAGTTC CGAGTGCGTC TCTTTCTCGA GAACCCCGAA
CCATGGGAAT TGGGTTGGCT GGCGCTGGTG TTGCGCGATC TGCACGATGG GTTGATCACT
ATTGGCTTCG GCGCCGCCAA AGGTTTTGGT CAGTGCAGGA TCGAAGACGG TGCTGTGACT
CTCGGTATTA TTCACGAAAG CGATTTTCCG TTGTCTGAGA CGAATGACCA GGAGCCGGCT
GTGCAGCAGG CGATTACCGC TAAACAGCAA CTTTTGCAAT CGAAAGGCGG GATGAGCGGC
GTCTATCGCA CGTTGATGCT TGATCCGGCA ACAGAGAACG ATTGGAGGAC ACTGGTAGAG
AGCTGGATCA GAGCGTTCAA TGTGACGGTC AAGGAATATA AACATGCCTT CGGTTTGAAG
AAAGACAGCT ACTTCGATGA GATCAACGGC ACATGGTTGC CCGATCTCTA TCCGGCGAGG
GTGTCATGA
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| Protein sequence | MKFRAITAKL TLRTALHVGT GSDTETTDDL LRRDVRGRLL IPGTAIAGAL RSIATRLAPR
FGGSPCQAIN NQSSSAACQC LVCQLFGDVN PREDSDTATA ARLLVYDAVL DTIPSLTIRD
GVGIDRVTGA AARRERIKFD YEVLPAGTVF KLRLEIDPKL PDEPKLLPLL AATLAEWEQG
RGAIGGRVNR GLGAFTLNEV QWIERDLNQA KVLIEFLHHG PPWHTTDGDR TWLTNQVQQV
RAWVEPYQGN DPVARSWVLA EFTLAATGPF LTNDVAQAGR SGFDHAPVFA AYEQGAKPVL
PGSSLRGALR SQAERIARTL ATFSAWDNGK NMGSRKTAFL TTCPACNPLT TKTDDPVASC
NSFIKALLKV ERQSQKNFCG AVLSSNSFIK ALLKVERDTF EQKGAEEKLC LACRLFGSPW
NGSRLRVEDA PFVGDKVTLK VLDFLAIDRF TGGGRDTAKF DAVVLWQPKF RVRLFLENPE
PWELGWLALV LRDLHDGLIT IGFGAAKGFG QCRIEDGAVT LGIIHESDFP LSETNDQEPA
VQQAITAKQQ LLQSKGGMSG VYRTLMLDPA TENDWRTLVE SWIRAFNVTV KEYKHAFGLK
KDSYFDEING TWLPDLYPAR VS
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