Gene Rcas_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3196 
Symbol 
ID5540694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4156081 
End bp4157121 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content64% 
IMG OID640895317 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_001433268 
Protein GI156743139 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.287158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCG AGCCGTCGCC GATCCGCGTG CTGTTGGTGG AAGACTCGCC CGGCCAGCGC 
GCGTTGTTGA TCCATTTGCT GCACGCGAGC GGCGCGTTCA CAGTGGTTGG CGTGGCGAGC
AACGGGCGGC AGGCGGTGCA GGAAGCGTCG CGGCTACGAC CGGACGTGAT TGCGATGGAT
ATCCACCTGC CGCTGATGGA TGGCTATGAA GCAACGCGCG AGATTATGCG TCGTTGCCCG
ACCCCTATTG TGATGATCAG TGCGAGCGCC GGCGAGAAGA AATCCATCGA CGCCCTGGCG
GCCGGCGCGT TGACTGTTAT CCGCAAACCG GGCGGGCGCC ACGCTGATCC TGCCGACAGC
GAGAACTTCC TCAAGACGCT GCGGCTCATG GCTGGCGTGC GGGTGGTGAC GCGCTTTGCG
CCACGCGCGC TTCCGCCCTC GACGACTCAG GCGCAGCCGG TGTCGGCGCC TGTTGGTGGG
GCGCAGGTGT TGGCAATCGC CGCATCAACC GGCGGACCGG CAGCCGTGCA GACAATCCTG
AGCGAACTGG GCAGGGGGTT TCCGCTGCCG ATTCTGCTCG TTCAGCACAT TGCGCGCGAT
TTTGTGCCTG CGCTCCAGGA TTGGTTGCAA CGAACGACGC CACTGCCGAT TCGAATTGCT
GCGCATGGCG AACGCCTGGC GCCTGGATGT GTGTACCTGC CGCCGGACGG TTTTCATTTG
CTGGCGGGTG GGCGTGGTGT TGTTGATCTG CGCCCGACGC ATCCTGACGA CCGATATTGC
CCCTCAGCCG ATCTCCTTTT CCGGTCGGTC GCGCAGGCAT ACGGTGCGCG CGCAATTGGC
GTCATCCTGA CCGGTATGGG TGATGATGGA GCGCGCGGTC TCAAGGAACT CCGTGAACGT
GGTGCTGTGA CCATTGCGCA AGACGAAGCG AGTTGCGTTG TGTATGGCAT GCCCCGCAGC
GCTGTCGAAT CCGGCGCCGT GACGCGCGAA GCGCCGCTCG ATCAGATTGC ATCGTCCATC
CGGACGCTGG TGGCAGTATG A
 
Protein sequence
MSSEPSPIRV LLVEDSPGQR ALLIHLLHAS GAFTVVGVAS NGRQAVQEAS RLRPDVIAMD 
IHLPLMDGYE ATREIMRRCP TPIVMISASA GEKKSIDALA AGALTVIRKP GGRHADPADS
ENFLKTLRLM AGVRVVTRFA PRALPPSTTQ AQPVSAPVGG AQVLAIAAST GGPAAVQTIL
SELGRGFPLP ILLVQHIARD FVPALQDWLQ RTTPLPIRIA AHGERLAPGC VYLPPDGFHL
LAGGRGVVDL RPTHPDDRYC PSADLLFRSV AQAYGARAIG VILTGMGDDG ARGLKELRER
GAVTIAQDEA SCVVYGMPRS AVESGAVTRE APLDQIASSI RTLVAV