Gene Rcas_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3159 
Symbol 
ID5540657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4100353 
End bp4100925 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID640895280 
Producthypothetical protein 
Protein accessionYP_001433231 
Protein GI156743102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.483508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCGCT CCGATGACTG GGACCGACTG TTTGCGCCAA ATGCTCCAAA GCGCGGTGGT 
CCGCTGCGTG CGCTGATCCA TATTGTTGTT GTGACGCTCC TGCTGGGGGC GCTGGCGGTC
GGAGGGATGT GGCTCGTCGG TCAGCGTCAG CAGCAGGCGG AACGTCTGGC GGCGACGGCA
ACTGCATATG CGGGGACAAT CGTGCCGCAA TTGACCAGCG TCGCCGGAGC GACGCAAACG
GTTGAGGCGC AGGGAACGGC AACCCGCATT GCGTTGCGCA CTGCGACCGC ACAGGCGGCG
GTCGGTCCAA CCGGTACGCC CGATCCGGGC ATTGGCAGCG GCGAGGTCGT CCGTGGCGGC
AATCTGCGTC GCGAGCCGCG CGTTGCCCCC GAAACCATCG TCGGGTTGAT CTATCCGGGA
GACAGGATTA CCTTTCTGGA GCGGCGCAGG GTTGGCGATC AGGTCTGGTT TCGGATTCGG
GTCGATCAAC CGGCGGTGGA TCGTTCTGGC GAAGGCGTTC CGGCCGGAAC GGAGGGATGG
GCATCGGCGC TGCTGCTCTC ACCACTCCCC TGA
 
Protein sequence
MMRSDDWDRL FAPNAPKRGG PLRALIHIVV VTLLLGALAV GGMWLVGQRQ QQAERLAATA 
TAYAGTIVPQ LTSVAGATQT VEAQGTATRI ALRTATAQAA VGPTGTPDPG IGSGEVVRGG
NLRREPRVAP ETIVGLIYPG DRITFLERRR VGDQVWFRIR VDQPAVDRSG EGVPAGTEGW
ASALLLSPLP