| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3144 |
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| Symbol | |
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| ID | 5540642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4075255 |
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| End bp | 4076619 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895265 |
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| Product | small GTP-binding protein |
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| Protein accession | YP_001433216 |
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| Protein GI | 156743087 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2262] GTPases |
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| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000830464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA GAGACGATCA GACGACACCC AACGGCGGGC GCCGCCTCTA CGAAACTCGC
CCGCCCCGTG AACGCGCTTT TCTTGTTGGT GTGGAATTGA CCGGTAGCCG CAGTGCATGG
AAAGCGGAAG ACTCGCTTCA AGAACTGGCT CTGCTGGCTG ATACCGCTGG TCTTGACGTG
GTGGGCAGCA CCTATCAGCG CCTCAAGCAA CCCTTCCCGC GTTATTTCAT CGGTCCTGGC
AAGATCGAGG AAATTGCTGC GCTGCGTGAC ACCTTGCACT ACGACCTCGT GGTGTTCGAC
GATGAGTTGA CGCCAGCGCA GGCGCGCAAT GTCGAAGACG CCTTGCAGAC GCGCGTGTTG
GACCGTACCG GTCTCATCCT CGACATTTTC GCGCGCCACG CACAGACCCA TGAAGGTCGT
GTGCAGGTCG AATTGGCGCA GTACCGCTAC CTGCTTCCCC GCCTGCGACG GCAGTGGACG
CACCTGGAGC GTCAGGCTGG CGGTGGCGGC GCTTCCGCAG GCGGCGTTGT CGGTCTGCGC
GGTCCGGGTG AAACACAGCT GGAAGTCGAC CGGCGCCTGA TTGCGCGCCG CATCCAGTGG
CTCGAACAGC AGATCGAGGA AGTGCATCGC CACCGCGAAG TTTACCGTGA ACGCCGGCGC
CAGAGCGGTA TTCCGGTTGT CGCCATCGTC GGCTACACGA ACGCCGGCAA ATCGACGCTG
CTCAATGCGC TTTCGGGGGC GAATGTACGC GCCGAGGACC GGTTGTTCGC CACGCTCGAT
CCGACGACGC GCCAGGTGAC GCTTCCCGGC GGGCAGCAGA TTCTTCTGAC CGATACCGTC
GGGTTCATTC AGAAACTGCC GACGCACCTG GTGGCGGCAT TCCGCGCAAC GCTCGAAGAG
ATCCGCGAGG CGGATGTGGT GCTCCACGTG CTTGATATTA CTCATCCGAA CGCAGCGCAA
CAGACGCAGA CCGTTCTCGA TACGCTGCGT GATCTTCAGG TGGAGGATCG CCCGACCCTC
ACCGTGCTCA ACAAAGTTGA TCTCATGGTC GGCATCAATG AAGCCGAAGT GGGCAGCATT
GCAGAAACGC TCGGTATGCC GGATGACTAT GTGGCAGTGT CGGCGCGCAA GGGGTGGGGT
CTCGATACAT TGCTGCGCCG CATCGAGCAG ACGCTGAGCG AGCGTATGAT GCCCTTGACG
GCGCTGATCC CCTACCGCCG CAACGATCTG GTGTCGCTCT GGCATACGCG CGGCGTGATC
GATGAGGAGC GGTACGAAGC GGAAGGAACG TTGATTGCCG GGCGTTTACC GGTTGATCTG
CTGCGCTGGT TCGAGCCGTT TTCACGCCCC GTTTGTGCTG CATAG
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| Protein sequence | MTIRDDQTTP NGGRRLYETR PPRERAFLVG VELTGSRSAW KAEDSLQELA LLADTAGLDV
VGSTYQRLKQ PFPRYFIGPG KIEEIAALRD TLHYDLVVFD DELTPAQARN VEDALQTRVL
DRTGLILDIF ARHAQTHEGR VQVELAQYRY LLPRLRRQWT HLERQAGGGG ASAGGVVGLR
GPGETQLEVD RRLIARRIQW LEQQIEEVHR HREVYRERRR QSGIPVVAIV GYTNAGKSTL
LNALSGANVR AEDRLFATLD PTTRQVTLPG GQQILLTDTV GFIQKLPTHL VAAFRATLEE
IREADVVLHV LDITHPNAAQ QTQTVLDTLR DLQVEDRPTL TVLNKVDLMV GINEAEVGSI
AETLGMPDDY VAVSARKGWG LDTLLRRIEQ TLSERMMPLT ALIPYRRNDL VSLWHTRGVI
DEERYEAEGT LIAGRLPVDL LRWFEPFSRP VCAA
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