| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3117 |
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| Symbol | |
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| ID | 5540613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4036422 |
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| End bp | 4037507 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895236 |
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| Product | beta-lactamase |
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| Protein accession | YP_001433189 |
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| Protein GI | 156743060 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.577011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCCG TGCCTGTTTC AGCGATTGAC ACCATTGTTG CCGATGCCAT CGCACAGCGC
ATTTTCCCCG GCGCCGTCGT CCGTGTTGCG CGCGACACCA TTGTGCTCCA CAACGCAGCA
TATGGCGCGA CGACCTACGA TGCGCCTGAG CGCATACCGG TCACGCCGAC GACCATATAC
GACATTGCGT CGCTGACCAA GATGTTTACA GCGACAGCGG CGCTGCGCCT GTACGAGGAA
TGCCTGATTG ACCTGGAAGC GCCGGTCGGT GCGTATCTTC CAGCGTTTCG CGCGCATAAC
GTGACGATAC GCCACCTGCT GACACACACC TCCGGGCTTG ACCTGCGCCT TTCGACCCTC
TGCCGCAGTG GACGCGATGC GCTGCTTGCA ACGGTTTACC ACACCTTGCC AGCGCATCCG
CCCGGCAGCC GCGTCGCCTA TACCAACATT AATTCATTGT TACTTGGTGA GATCGTTGCT
ACGGTATCCG GGCAACCACT CGACCGCGCC ATTGATGCCC TGATCTGCCA GCCACTGGGA
CTGCGCCACA CGATGTTTTG CCCTGATTCG GCATTGCTGG CACGGATTGC ACCAACTGAA
TTCGATGATG CGTGGCGTGG TCGCCTGGTC CACGGAACAG TCCACGATGA AAGCGCGTAT
GCGCTGGGTG GGGTCGCCGG GCATGCCGGT CTTTTCAGCA CTGCCGACGA TCTCTGGAGA
TTCTGCCGCG CCTGGCTGCC TCCAACCCCC GACTGCGCTG GCGGATCGTT TTTGCAGCCA
GAGACAATTG CACTGGCAAC GACGAATCAC ACATCAGGGT TGACGCTGGC GTGCGGACTG
GGATGGATGC TCGACCGACC GAACTTCATG GGTCCTGCAC CATCGGGAAG TTACGGTCAC
ACCGGCTTTA CCGGACCGGC GCTGGTAATC ATCCCACAAC ACCGCGTGAT CATTATCGTT
CTGAGCAATC GCGTGCATCC CCGGCGCAGC GCGCCGCGCC ATCACGCCGT CACTGCCGCA
ATCGTAGCCG CAACGCTTGA TAGTATCACC GTCAGACATA GAGAAACGCT CCACACCCTC
GCTTGA
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| Protein sequence | MPAVPVSAID TIVADAIAQR IFPGAVVRVA RDTIVLHNAA YGATTYDAPE RIPVTPTTIY
DIASLTKMFT ATAALRLYEE CLIDLEAPVG AYLPAFRAHN VTIRHLLTHT SGLDLRLSTL
CRSGRDALLA TVYHTLPAHP PGSRVAYTNI NSLLLGEIVA TVSGQPLDRA IDALICQPLG
LRHTMFCPDS ALLARIAPTE FDDAWRGRLV HGTVHDESAY ALGGVAGHAG LFSTADDLWR
FCRAWLPPTP DCAGGSFLQP ETIALATTNH TSGLTLACGL GWMLDRPNFM GPAPSGSYGH
TGFTGPALVI IPQHRVIIIV LSNRVHPRRS APRHHAVTAA IVAATLDSIT VRHRETLHTL
A
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