Gene Rcas_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3113 
Symbol 
ID5540609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4031764 
End bp4032348 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content61% 
IMG OID640895232 
Producthypothetical protein 
Protein accessionYP_001433185 
Protein GI156743056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAT CATTCAGTGC AGCTGAACTC GACCCATACG CCGAGCGCGT CACCAGCGGC 
GTTGCAACGC TTGGAGGCGT TCTGATGCTG CCAACACTGT TTCTCTATCT CAGCGGCTTG
CTGGTGGCAG GCATTGCGCT GACCGGCGCT GTCGTTACGG TTGCCGTCGC GCTGGCGTTG
GCGGCGTGGC TGACGCTGAA CTATGCCATA CAACCGGTCG CTTATGTGGC GGCAAAGGAT
GCGTTGATCG TTCGACGGCG TTGGGCGCGC GCGTTACGCG TTCCTTTCAA ACAGATCGCT
GGCGTCTCAC CGGCGGGCGC ACTGGCGGAT GTGCCACGCT TTGGTCTGCG TCGTTCGTTC
AATGCCGGTG TGTTTGGGTA TCACGGTCTC TTTCATCTCG ATCCATACGG GCGCGTGTTT
TTCGCCGCGA CGCATCGAGA ACGGTTGGTA GCCGTAGCGC GGTATGATGC GCCGTCGCTC
ATTATCAGTC CGGCGCGTCC GCGTGAGTTT GTCGATGCGC TGCGTGAAGC GTTGCTTCAG
TATGCGTCGG CGGATCGGGA AACTCACCCT GCGCCGACGC AGTAG
 
Protein sequence
METSFSAAEL DPYAERVTSG VATLGGVLML PTLFLYLSGL LVAGIALTGA VVTVAVALAL 
AAWLTLNYAI QPVAYVAAKD ALIVRRRWAR ALRVPFKQIA GVSPAGALAD VPRFGLRRSF
NAGVFGYHGL FHLDPYGRVF FAATHRERLV AVARYDAPSL IISPARPREF VDALREALLQ
YASADRETHP APTQ