| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3090 |
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| Symbol | |
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| ID | 5540586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4004924 |
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| End bp | 4007512 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640895209 |
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| Product | fibronectin type III domain-containing protein |
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| Protein accession | YP_001433162 |
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| Protein GI | 156743033 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATG CGGTCATACT TGCGCTTGGA TTGGCAATGG TTCTGATCGG CGGCGTGTTC
GCTGTTGAGC CATCTCCTTC TCCGGCGACG CTGACAATTA CCGACATTCA GGTCATCCCA
GCCGCCAGCA GCGCCACAAT TCGCTGGACG ACCAATCTCT CGGCAGGCGG CGCGGTCTTC
TACGGTCCCG CCGATGGCGC CTGGACGGAG AGCGCTCCTG CCAGCGGCGA TGGAACCTCC
CATACTGCGT TGCTTTCCGA CCTCGTCCCT GCCACAACCT ATCGCTTCTG GATCACCGCC
TATCGCTCCG ACGGGACGAA TGCTTTCTCG TCGCCGCAGA CCTTTACCAC CGCCGTCGCC
ACTCCCACCC CCACCCCTGC GCTCAGCGCT CCGGCGTCTC TCATGCCGCC CGCCTCCGGT
CCCATCGTTT CCGACGACTT CAACCGCACC GGCGGGCTGG ATTCCTGGAC GTTCGTCGAT
CCAGGCGGCG CGGCGTATGA GTTGACCGGC ACGGACATCC GCCTGATCGT GCCTGATGGT
CCGCCGCGCG AGCCGTGGAC GAACGGCAAC ACGGCGGTGC GCCTGCTGCA AGCGGCGCCG
GACGCCGACT TCGACGTGAT AGCAAAGTTC AACTCGCGGG TGAGCGGGCA TATCGCAATG
CAAGGGTTGA TCGCGCAGAC AAGCGATGCG ACGACCTTTG TGCGCTTCGA CATTTCGAGC
CGGAGGAACA GCGCTGGCGT GGAGCAGGTG CGACTGTTCG CCGGATTGGT GAGCGGGACG
AGCGCGACGA CCTTCAACAA CAGTGCGCTC AGTGCGCCAG GGCATCCGGT ATGGCTGCGG
ATGACGCGCA GTGGGACAAA TTGGCAGTTT CGCTATTCGT TCGATGGCGC GAATTGGACG
CTGTTTACGA ATGGGACGGT GATGTTAAGC GTCACGAGCG TAGGGGTGTT CGCGGGGAAT
GCCGAGGCGA GCGGGCGGTA CGCGCAGCCG TTCACGGCGT CGGTGGATTA TTTCCACGTG
GCGAACGCGC CGCTCCCCGA CGATCCGCAG GCGCACCCGG ACGCACACGC GCCGCTGCTG
GCGTGCCCGC CGCACACGCT GAGCGGGACG ACGCTTACCG TGACGGGGTA CAGCGACGAG
CCGACGACGG CGGAGTTGCG CTACGGGTCG CGCGCGGCGG CGGGAGGTGT GCAGACGAGC
GGCTCAGGGC AGACGCACGC CTTCACCATC AGCGGGTTGC AGGCGGCGAC GAACTACTGG
TATCGGTTGA CGGTGACGGA CGCAAGCGGG AAGATGGCGC GATGCAGCGG GGTCTTTCGG
ACATGGCCGA CAGCAGTGGG GAGCCAGCCG GTGATCGATA TATGGGACGG ACCGGTGCAG
ACGTTCGGAG CGCGGGGGAA CCCGCAGCGA TGGGTGAATG TGCTGGGGCG GATGAGCGAC
GCCGACGGGT TCGAGTATAA CATGGCAGCG TTTGGGACGG CGGCGTGGCC GCTGCGCTAC
CGCTTGAACG GCGGAGCGGA GCGGTCGCTG ATGCCGGGAC CGGGGAGTTA CACGAACTCA
TTCTTGAACT GGCGGCGGGT GTACACAACA GGGGAGTTCA ACATTGAGCT GGATCGGGCG
GAGTTGAGCG CCGGAGACAA CACGCTGGAA ATAACGGCGG TGGACCGGCT GGGGAACACG
AGTGTGCAAA CGGTGACGGT GCGGTATATC CCTGGCGCGA CGTGGCCGCT GCCGGATGCG
ATTGACTGGA GCGTGGTAGA GCGGGTGGGA GAGGCGGCGC AGGCGGTGGA CGGACTGTGG
GCGCTGGAGG AGGGAAGTGT GCGCCCGGTG TCGACGGGGT ACGACCGGTT GCTGGCGATT
GGAGATGTGA CGTGGACTGA CTATGAAGTA ACGGCGGCGG TGACGATCCA CGAGATCGAT
ATGTATCGCG GGCAGCGACC GAATAGCGGG GGACCGGGGG TGGGGTTGCT GCTGCGGTGG
CAGGGGCACT GGGATGCACC GGCAGGGCAG GAGACGCAGC CGCGCTGGGT GTACTACCCG
CTCGGAGCGC TGGGATGGTA CCGGCTGGAA CGGTACCCGG ACGCGAGTTC GACGCAGCGG
GCGATGCACC TGCATCTGGA CACAGGGGCG GCGACAGTGT TTGCGCGCGA CCTGAGCGGA
ATGCGGTTGC GGATGGGGGA GACGTATATG TTCAAGATGC GGGTGGAGAC AGTCGCAGGG
GGAGGGCAGC GGTACCGGCT GAAGGTGTGG CGGGCAGCAG AGGCGGAGCC GGCGGGATGG
ACGGTGGACG GGGTTGCGCC GGCGGGAGAG CAACCGCTGG AGCGTGGGTC GCTGCTGCTG
GTGGCGCACC ACGTCGATGC CAGTTTTGGC AACATTACCG TGCGACCGCT CAGTGGCGTC
GGAGGACCGA CTGCCACCCC AACACCGACA CCGAGCGCAA CGCCGACACC GAGCGCAACG
CCGACACCGA GCGCAACACC GACACCGAGC GCAACGCCGA CACCGAGCGC AACGCCGACA
CCGAGCGCGA CACCAATTGT CGGCGCTTCT CCGTCGGTCG TCTGGTTGCC GCTGGTCACC
AACCCGTAA
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| Protein sequence | MRYAVILALG LAMVLIGGVF AVEPSPSPAT LTITDIQVIP AASSATIRWT TNLSAGGAVF
YGPADGAWTE SAPASGDGTS HTALLSDLVP ATTYRFWITA YRSDGTNAFS SPQTFTTAVA
TPTPTPALSA PASLMPPASG PIVSDDFNRT GGLDSWTFVD PGGAAYELTG TDIRLIVPDG
PPREPWTNGN TAVRLLQAAP DADFDVIAKF NSRVSGHIAM QGLIAQTSDA TTFVRFDISS
RRNSAGVEQV RLFAGLVSGT SATTFNNSAL SAPGHPVWLR MTRSGTNWQF RYSFDGANWT
LFTNGTVMLS VTSVGVFAGN AEASGRYAQP FTASVDYFHV ANAPLPDDPQ AHPDAHAPLL
ACPPHTLSGT TLTVTGYSDE PTTAELRYGS RAAAGGVQTS GSGQTHAFTI SGLQAATNYW
YRLTVTDASG KMARCSGVFR TWPTAVGSQP VIDIWDGPVQ TFGARGNPQR WVNVLGRMSD
ADGFEYNMAA FGTAAWPLRY RLNGGAERSL MPGPGSYTNS FLNWRRVYTT GEFNIELDRA
ELSAGDNTLE ITAVDRLGNT SVQTVTVRYI PGATWPLPDA IDWSVVERVG EAAQAVDGLW
ALEEGSVRPV STGYDRLLAI GDVTWTDYEV TAAVTIHEID MYRGQRPNSG GPGVGLLLRW
QGHWDAPAGQ ETQPRWVYYP LGALGWYRLE RYPDASSTQR AMHLHLDTGA ATVFARDLSG
MRLRMGETYM FKMRVETVAG GGQRYRLKVW RAAEAEPAGW TVDGVAPAGE QPLERGSLLL
VAHHVDASFG NITVRPLSGV GGPTATPTPT PSATPTPSAT PTPSATPTPS ATPTPSATPT
PSATPIVGAS PSVVWLPLVT NP
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