| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3084 |
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| Symbol | |
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| ID | 5540580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3995304 |
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| End bp | 3996248 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895203 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001433156 |
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| Protein GI | 156743027 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCACG TTCTGGTAAC CGGTGGCGCC GGCTTTATCG GTTCACACCT GGTTGAGGCG
CTGCTGCGAC GCGGCGATCA GGTGCGCGTC TTCGACAATT TCTCCACCGG TCGGTACGAT
AATCTTGCGC ACATTCGTGA TGATATTGAA ATTATCGAGG GTGATTTGCG TGATGAAGAC
GCTGTGCGCC GCGCTGTCGC CGGCGTCGAG GTCATCTTTC ACCAGGGTGC GCTGGCGTCG
GTGCAGCGCT CAGTCGATGA TCCGATTACC ACGAATGCGG TAAATGTGAC CGGCACGCTC
CACGTGCTGA CGGCAGCGCG TGACGCAGGT GCGCACCGTG TGGTCTTTGC TTCGTCATCG
TCGGTCTACG GTGATACGCC AACGCTGCCC AAGGTCGAAA CGCAGGCGCC GCATCCGCTC
TCGCCCTATG CGGTCTCGAA ACTGGCGGGC GAACAGTATT GCATGGCGTT CAGCAGCGTC
TATGGTCTGC CCGCAATTGC GCTACGATAT TTCAATGTAT TTGGTCCCCG GCAGGACCCG
CATTCGGAGT ATGCCGCCGT TATTCCCCGC TTTATCGACC GGATGGTGCG CGGTGTTCCG
CCGATCATCT ATGGCGATGG CTTGCAGTCG CGCGATTTTA CCTATATCGA GAATGTGGTG
GACGCGAACC TGGCTGCAGC TGATGCGCCT GCCGATTGTT CAGCCGTCTT CAATGTCGGC
GCCGGTGCGC GCACCTCGCT GCTCGAACTG GCGGCGCAGA TCAACCATTT GCTGGGCAGT
AATCTTGCGC CGGATCACCA ACCGCCACGT CCCGGCGATG TGCGCCATTC GCAGGCAAGC
ATCGATGCGA TCCGCGAAAC ATTGGGGTAT GCGCCACGCA TCTCACTCAC CGAGGGTCTG
GCGCGAACGC TCGCCTGGTT CCGTCACGAA GGAGCACGCT CATGA
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| Protein sequence | MAHVLVTGGA GFIGSHLVEA LLRRGDQVRV FDNFSTGRYD NLAHIRDDIE IIEGDLRDED
AVRRAVAGVE VIFHQGALAS VQRSVDDPIT TNAVNVTGTL HVLTAARDAG AHRVVFASSS
SVYGDTPTLP KVETQAPHPL SPYAVSKLAG EQYCMAFSSV YGLPAIALRY FNVFGPRQDP
HSEYAAVIPR FIDRMVRGVP PIIYGDGLQS RDFTYIENVV DANLAAADAP ADCSAVFNVG
AGARTSLLEL AAQINHLLGS NLAPDHQPPR PGDVRHSQAS IDAIRETLGY APRISLTEGL
ARTLAWFRHE GARS
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