| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3079 |
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| Symbol | |
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| ID | 5540575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3986948 |
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| End bp | 3987628 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895198 |
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| Product | succinate dehydrogenase/fumarate reductase cytochrome b subunit |
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| Protein accession | YP_001433151 |
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| Protein GI | 156743022 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCAA CACTGACGCT TTATCGCACA ACCATTGGCA AAAAAGCGGT GATGGCGATT
ACCGGCTTTA TTGGCTACGG GTTTGTCATT CTGCACATGA TCGGCAATCT GAAGATTTTC
GAGGGCGCGG AAGGGTTCAA CGAGTATGCA CACTTCCTGC GCACGGTGGG CTACCCGATG
ATACCGGAGC GCGGGTTGCT CTGGGTGCTG CGCATCGTTT TGCTGGCATC GGTCATTCTC
CACGTCGTTG CCGCCATTCA GTTGACGCGC CTCGATTGGG CGAGCCGCCC GAAAGGATAC
CGCGAGACCC GCCGGAAACA GGCGACGTTC GCCTCGCTCA CCCTGCGTTG GGGGGGTCTG
GCGATCTTCC TCTTTATCGT CTACCACCTG GCGCACTTTA CCTTCGGGCT TGGCATTCCC
AACTTTGGCG GGCATGAGAC AGCCTATCAG AACGTTGTGG CCGGCTTCTC CAATCCGATC
AATGTCGTCC TTTACATTGC CGCCGTCGGC GCACTCGGCA TGCACCTGTA CCACGGCGTC
TGGAGCATGT TCCAGACCCT GGGACTCAAT GGTCCACGCA CCGATGGCTT CTGGCGCGGT
CTGGCGACGC TCTCCGGCAT TCTGCTGTTT CTCGGTTTTT CGACCGTGCC GATTGCGGTC
ATCACCGGAC TGGTGCGCTG A
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| Protein sequence | MAATLTLYRT TIGKKAVMAI TGFIGYGFVI LHMIGNLKIF EGAEGFNEYA HFLRTVGYPM
IPERGLLWVL RIVLLASVIL HVVAAIQLTR LDWASRPKGY RETRRKQATF ASLTLRWGGL
AIFLFIVYHL AHFTFGLGIP NFGGHETAYQ NVVAGFSNPI NVVLYIAAVG ALGMHLYHGV
WSMFQTLGLN GPRTDGFWRG LATLSGILLF LGFSTVPIAV ITGLVR
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