| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3007 |
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| Symbol | |
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| ID | 5540503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3903323 |
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| End bp | 3904138 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895129 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001433082 |
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| Protein GI | 156742953 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TGATCTACGC CGGTCCGGGT CCCTGGCGCG ATGAAGCGCT CGCTACCGCC
GCTCAGTTCG TCGGTCAGAT TGCGACATCG GTGACGCTAG TGACCGGCGG CGGCATACGC
AACATGGAAT TGCTTGATGA TGCAGTGGTG CGCCTGCACC TTCCGCCTGA TGTGGCCGTT
AAGCGCCGGG TGGTGGAAGG TTCACCGCAG GAAGCGATTC TGATGGTTGC CGATGAATCT
GTGTATGATC TGGTGATCTT CGGTCGATTT CAGCGCCCGC TGGAACGCCT GCTGCCGCTC
CGTCGCAGCG ATACGCTAAC ACGTCGGCTG CGGTCGGCGG TCCTGCGCGT CAGCGGACCG
GTGCGACCGG TCAGGCGTAT CTTGCTTGCC AGCGGCGGCG ACCAGCATAC CTTCGCTACT
GCCAGGCATG CCGCGCTGAT AGCAACACCG CTGGGAGCAT CGGTCACGCT CTTGCATGTG
GTCTCGCAAC AACCGGTGGT CTTCGAGGCG CTGGCGCCGC TGGCATCCGA TGAAGCCGCC
TTTCTGTCCG GCGACACGCC GGAAGCGGCG ACGCTGCGCC AGGCTGCCGC CTGGCTGCGT
GCACAGGGCA TCGATGTTGC TCTTCGGGTG CGATTCGGTC TGGTGCTGGA CCAGATTCTG
GAGGAATTGC ACGAAGGCGA TTACGACATC CTTGCGCTTG GAACCCATCA TGCCGCTGGA
CCGCTTGATC GTGTGCTGCT CGAAGATTTG ACGGGCGATC TCCTTGATCG CTGCCCGCGC
ACGGTGCTGG TCGCCCGGCG TATCCCGCAC GATTGA
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| Protein sequence | MNLLIYAGPG PWRDEALATA AQFVGQIATS VTLVTGGGIR NMELLDDAVV RLHLPPDVAV
KRRVVEGSPQ EAILMVADES VYDLVIFGRF QRPLERLLPL RRSDTLTRRL RSAVLRVSGP
VRPVRRILLA SGGDQHTFAT ARHAALIATP LGASVTLLHV VSQQPVVFEA LAPLASDEAA
FLSGDTPEAA TLRQAAAWLR AQGIDVALRV RFGLVLDQIL EELHEGDYDI LALGTHHAAG
PLDRVLLEDL TGDLLDRCPR TVLVARRIPH D
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