| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2979 |
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| Symbol | |
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| ID | 5540471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3863087 |
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| End bp | 3864766 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895097 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001433054 |
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| Protein GI | 156742925 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.633648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000413857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAGCG ACCTCAAACG CCACAGTCGC ACGATTACCG ATGGGCGCAC CCGCGCGGGG
GCGCGCGCGA TGCTCAAGGC AATCGGCTTT ACCGACGAGG ACCTGGCAAA GCCGATCATT
GGCATTGCCA ACACCTGGAT CGAGACGATG CCGTGCAACA TCAACCTGCG CGCGCTGGCG
GCGCGGGTCA AGGAGGGTGT GCGCGCAGCA GGCGGCACGC CGATGGAGTT CAACACCGTC
GCCATTTCCG ATGGCGTCAC GATGGGCACG GAAGGAATGA AGGCATCATT GATCAGCCGC
GACCTGATCG CCGATTCCAT CGAACTGATG GGGCGCGGCT ATATGTTCGA CGCGATTATT
GCGCTGGTGG CGTGCGATAA AACGATCCCC GGCGCGGCGA TGGGGTTGAC GCGCCTGAAC
GTCCCCGGCT TCCTGCTCTA CGGCGGATCG ATTGCTCCTG GTCACTGGCG CGGCAAAGAG
ATCACGATTC AGCACGTGTA CGAGGCGATT GGTGCGGTTG CTGCCGGTAA AATGACCGAT
GAGGAATTGA AAGAGATCGA GGATGCGGCA TGTCCCGGTC CTGGCGCGTG CGGCGGTCAG
TACACCGCCA ACACAATGGC GACGGTCATG GAGATTATCG GGTTGTCGCC CATTGGCACG
GCAGCAGTGC CGGCCGCCGA CCCACGCAAG GACTCGGTCG GTTATCGTGC CGGTCAGTTG
ATCATGGATG TGTTGCGGCG CGACCTGAAG CCGCGCGATA TTCTGACGCG CGCTGCGTTC
GAGAATGCGA TTGCCAGCGT GGCATTGACC GGCGGTTCGA CCAATGCGGT GCTCCACCTG
CTGGCGTTGG CGCGGGAGGC CGGCGTGCCT CTGACGCTCG ACGACTTCGA CACAATCAGC
CGCCGCACCC CGCTCTGCTG CGACCTCATG CCGAGCGGGA AGTACTCTGC CATTCACGTC
GATCAGGCAG GCGGCATCCA GGTGATCGCC AAACGGCTCG TCGATGGCGG CTTTGCCCAC
GGCGACGCAA TCACCGTCAC CGGGCGCACA CTGGCGGAAG AGGCAGCGGA CGCCGTCGAA
ACACCCGGTC AGGATGTGAT CCGTCCGCTC GACAATCCGA TCAAACCGAC CGGCGGGTTG
CTGGTGCTGC GCGGCAACCT GGCGCCCGAA GGGTCGGTCG TCAAACTGTT CGGCTACGAA
CGCACCTACC ACCGCGGTCC GGCGAGGGTC TTCGATAGCG AAGAGGCGGC AATGGCTGCG
ATTGTCGGCG GCGAAATCCG GCCGGATGAC ATTGTTGTTA TCCGCTACGA AGGACCGCGC
GGCGGTCCTG GCATGCGTGA GATGCTTGGC GTTACCTCGG CAATCGTCGG CGCCGGTCTT
GGTCAGTCGG TGTCGCTCGT TACCGATGGG CGCTTCAGTG GTGCGACGCG CGGCGTGATG
ATCGGGCATG TGGCGCCGGA AGCGGCGCGT GGCGGCCCGC TTGCGATTGT TCAGGAAGGG
GATGAGATCG AAATCAATCT GGATGAGCGG CGCGTCGATC TGGTGCTTTC GGAAGAAGAG
ATCGCAGATC GATTGCTCGC CTGGCAGCCA CCAGCGCCGC GCTTCGAGTG GGGCGTAATG
GCGCGCTACA GCGCGCTGGT GTCGTCGGCA TCCGAGGGTG CAGTGCTGGT GACGCCGTAA
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| Protein sequence | MSSDLKRHSR TITDGRTRAG ARAMLKAIGF TDEDLAKPII GIANTWIETM PCNINLRALA
ARVKEGVRAA GGTPMEFNTV AISDGVTMGT EGMKASLISR DLIADSIELM GRGYMFDAII
ALVACDKTIP GAAMGLTRLN VPGFLLYGGS IAPGHWRGKE ITIQHVYEAI GAVAAGKMTD
EELKEIEDAA CPGPGACGGQ YTANTMATVM EIIGLSPIGT AAVPAADPRK DSVGYRAGQL
IMDVLRRDLK PRDILTRAAF ENAIASVALT GGSTNAVLHL LALAREAGVP LTLDDFDTIS
RRTPLCCDLM PSGKYSAIHV DQAGGIQVIA KRLVDGGFAH GDAITVTGRT LAEEAADAVE
TPGQDVIRPL DNPIKPTGGL LVLRGNLAPE GSVVKLFGYE RTYHRGPARV FDSEEAAMAA
IVGGEIRPDD IVVIRYEGPR GGPGMREMLG VTSAIVGAGL GQSVSLVTDG RFSGATRGVM
IGHVAPEAAR GGPLAIVQEG DEIEINLDER RVDLVLSEEE IADRLLAWQP PAPRFEWGVM
ARYSALVSSA SEGAVLVTP
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