| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2957 |
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| Symbol | |
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| ID | 5540448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3836383 |
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| End bp | 3837570 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895077 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001433035 |
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| Protein GI | 156742906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000652955 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCTCG CCATCAATGG CATGTTCTGG TCACAACCGA CAGTCGGCAG CGGGCAGTAC
CTGCGCATGC TGGTACACGC CCTGCCTGCC GTTGCGCGGA ATATTCGGCT GACGCTGCTG
CTGCCCGCGT ATCGCGCGGT CACTGAACCA CTCCCGCCGG ACATTCAAGC AGTGCATGTG
CAGACACCAT TCGATGGGCG CAGCGAAAAC CTGGCGAAGG TCTGGTTCGA GCAGGTCGCC
GTCCCGCTCG CGGCGGCGCG CCTGCACGCC GATCTGCTCC ACGTTCCCTA TTTTGCGCCG
CCGCTCGTTG CGCCGCTGCC AGCGGTCGTC ACCATTCTCG ACATCATCCC GCTCATTCTG
CCGGAGTATC GCGGCAGTAC GGCGGTTCGC CTCTATGTGC GCCTGGTGGC GCGCGCCGCG
CGGCAGACAA CGCAGATTAT CGCTATTTCG CAGCATAGCG CCGGGGACAT CATTCACCAC
CTGGGCTGCT GCGCGGCGCG CGTGACGGTG ACGCCGCTCG CGGCTGGCGC ACAGTTCCAC
CCCCGCGACC GCGCGTGCGC CGAACGAGAA GTTGCAGCGC GCTATGGCGT AACGCCACCG
TTCGTCTACT ATGTCGGTGG GCTGGACGCG CGCAAGAACC TGGCAACCCT CGTACACGCA
TTTGCACGTA TGCGCTACGC CGGAGGACCA CCCGCCACAC TGGTGATTGC CGGACGCGCG
CCTGGCAGCG ATCCGCGCAT GTTCCCCGAC CTGGATGCAA TGATTGCATC CGCTGGCGCA
GACTCGTTCG TGAGACGCAT CGACGTGCCT TACGAAGACG CGCCACTGCT CTATTCCGCC
GCCACAGTGT TTGCCTTTCC GTCGCGGTAC GAAGGGTTTG GACTGCCGCC GCTCGAAGCC
ATGGCGTGCG GTGCGCCGGT GATCGTCGCC GACGCAACCA GCCTTCCCGA GGTCGTTGGT
GAGGCGGCGC TGCGGGTCCC GCCCGACGAT ACACCCGGCT GGATCACGGC GCTCTGGCGC
GTGCTGGCGG ACGACACGCT GCGCGCCGAT CTCTCCCGAC GCGGGCTGGA GCGCGCGACC
TGTTTTCGAC CCGAACGCCT TGCGCGCGAA ACGCTGGCGG TGTATGAACG CGCCCTGAAC
TCAGGCGGAT GTCGTATTGC TCACAATGAC AGAACGACAT CGGTGTGA
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| Protein sequence | MHLAINGMFW SQPTVGSGQY LRMLVHALPA VARNIRLTLL LPAYRAVTEP LPPDIQAVHV
QTPFDGRSEN LAKVWFEQVA VPLAAARLHA DLLHVPYFAP PLVAPLPAVV TILDIIPLIL
PEYRGSTAVR LYVRLVARAA RQTTQIIAIS QHSAGDIIHH LGCCAARVTV TPLAAGAQFH
PRDRACAERE VAARYGVTPP FVYYVGGLDA RKNLATLVHA FARMRYAGGP PATLVIAGRA
PGSDPRMFPD LDAMIASAGA DSFVRRIDVP YEDAPLLYSA ATVFAFPSRY EGFGLPPLEA
MACGAPVIVA DATSLPEVVG EAALRVPPDD TPGWITALWR VLADDTLRAD LSRRGLERAT
CFRPERLARE TLAVYERALN SGGCRIAHND RTTSV
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