| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2954 |
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| Symbol | |
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| ID | 5540444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3831291 |
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| End bp | 3833348 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895073 |
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| Product | biotin/lipoyl attachment domain-containing protein |
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| Protein accession | YP_001433032 |
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| Protein GI | 156742903 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.738213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000297505 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAACCG GCCATGCATC CCAGGTCGCC AGCGTTCAGG ACGATGACGT GTTCGTTCGT
CCGGGTATGA CCGCGCGCGA GATTGTTCAG GCTGTGCGCA ACCTGAAGGG TGTCTGCCTG
ACGTCGGTGA GCATGCGTGA CGCCGGGCAG TCCGACTTTA AAAACCGCCA CCGGATCTAC
GATCTGAAGA CGCTGGCGCC GCTGTATAAC CGGATGGGAC TGTTCAGCGC CGAGTGTCAC
GGTGGAGCGC GCTGGCACGT CGGGATCATG AATCGCCGCG AAAGCCCATT TGAAGAGATC
CAGATTCTGC GCCGGTTAAT GCCCAACGTC CTGCTTCAGA CCCTGGTCCG TGAGACGAAC
CTGTGGGGCT ACCGCCCCTA CCCCAGGAAT GTCATCGAGT ATGCCGTTGC ACAGGTGGAT
ATTGATGTCT GGCGCTGTTT TTCGTTCCTC AACGATGTGC GCAATATGCG CGCGGTAGCC
GAAGTGGTGA TGAAGCGCGG ACGCCTGTTC GAGCCAGCGA TCTCGTTTAC CGTGGCCGAT
TGGGCGACCG ATGCGTACTA CCTAGGTGTG GTGCGCGAGA TTGTTGCCCT TGCCGGCGGC
GTCGATGAGA TCATTCTCTG CATCAAGGAT ATGGCCGGCG TCGGCAATCC GGCGCGCATC
AGCCAGTTGG TGACGACGAT CAAGGAGCAC TACCCCGATT TGCTGATCCA CTACCACCGC
CACATCACCG ATGGGTTGGC AATCCCGGCG CTGTTCGCCG CCGCCCAGTC TGGCGCCAAG
ATCGTCGATG TCCAGGAGGA TGCCCTGGTG CGCTTCTACG GGCACCCGCC CATCCTTGGA
GTGCAGGCTT ACTTTGAGGA GGGTGGCATC CATGTGCATC TCAACCGAAT GGCTGCCGAG
CAGACCAATC AGCAGGTGCG CGAGTGGATC GGGCACTATG AGTGGGCCGA GTCGCCGTTC
AAGGGGTACG ATCACGGTGT GACCAAACAC CGGATGCCTG GCGGCGCCTT CCCGAGTTCG
TTCGAGCAGG CTGAGAAGGG GGGCTTCCTG CATCTCATGC CGGCGATCCT GCGTGTCATG
GCTCTCTATA ACCAGATCGT GCGCTACTTC GATGTCACGC CAGGTTCGCA GATTACCTGG
GTGACGTGTA GCGGGATCGT CAACCGCTAT GCGAAGGAGC AGGGTGAGAG CGGCGTCCGA
CGGCTTATTG CGCTGCTCAG CAAGTTCGTC GAGGAGAAAG GGCAGGATAT CGAGGCTATG
AGCGAGGAGG AGCGCGAGGA GTTACTTCAA CTCTTCCGCA ATGCGTCCGG TGATTTTAAG
AACCTGCTGG TGGGCGGCTA CGGCAGGCTG CCGGTCGGCT GGCCGGCCGA CTGGGTCTAC
CAGAGCGCCT TTGGCGACGA GTGGCAGGCG AAGATCCAGG GGCGTACCGA TCGCTCGCCC
CTCGATACGC TCAAGGACGA TGATCTCGAC AGGCTGCGCC AGACCTTGAG CGAAGCCATC
GGGCGCGCAC CGACCGAGGA GGAGTTCATT CTCTACCTGA TGCATCCCAA AGATGCCCTC
AGTTTCATCG AGTTCCGCGA GCGCTACGGC ATGGCGCCCC TGGTGTTGCC GACCGATGTC
TGGCGCAACG GGCTGCGACG CAGCGGCGAT AAAGTCGATT TCGAGCTCGA TGGCAAGCCA
TACTGTATCG AACTGGTATC GGTTGGCGCT GAACACGAGG GCGTTATCCA CGTGGTGCTG
AAGGTCAACA ATGTGACCCG GGTGTACCCC GTGGCGACGC CGCGTGCCAG GAAGGCGGAG
ATACGGATGG CGAAGGGTCC CAATGAAATC GGCGCTCCGA TCAACGGCAA TGTATGGCGG
ATCGGGAACC CGCAGCGCGG CCCGATCCAC GTCGGCGATG TTGTTCACAA AGGCGAGGAG
GTGGCGAACC TCGAGGCAAT GAAGATGGAG CACGCTATTC TCGCCCCCTT TAGCGGACGG
ATTGCCGAGG TCTGCATCAA GCTGAACGAT GTCGTCAAGG AAGGACAGTT GCTCTTCGTG
CTCGAGAAGA ACGCCTGA
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| Protein sequence | METGHASQVA SVQDDDVFVR PGMTAREIVQ AVRNLKGVCL TSVSMRDAGQ SDFKNRHRIY
DLKTLAPLYN RMGLFSAECH GGARWHVGIM NRRESPFEEI QILRRLMPNV LLQTLVRETN
LWGYRPYPRN VIEYAVAQVD IDVWRCFSFL NDVRNMRAVA EVVMKRGRLF EPAISFTVAD
WATDAYYLGV VREIVALAGG VDEIILCIKD MAGVGNPARI SQLVTTIKEH YPDLLIHYHR
HITDGLAIPA LFAAAQSGAK IVDVQEDALV RFYGHPPILG VQAYFEEGGI HVHLNRMAAE
QTNQQVREWI GHYEWAESPF KGYDHGVTKH RMPGGAFPSS FEQAEKGGFL HLMPAILRVM
ALYNQIVRYF DVTPGSQITW VTCSGIVNRY AKEQGESGVR RLIALLSKFV EEKGQDIEAM
SEEEREELLQ LFRNASGDFK NLLVGGYGRL PVGWPADWVY QSAFGDEWQA KIQGRTDRSP
LDTLKDDDLD RLRQTLSEAI GRAPTEEEFI LYLMHPKDAL SFIEFRERYG MAPLVLPTDV
WRNGLRRSGD KVDFELDGKP YCIELVSVGA EHEGVIHVVL KVNNVTRVYP VATPRARKAE
IRMAKGPNEI GAPINGNVWR IGNPQRGPIH VGDVVHKGEE VANLEAMKME HAILAPFSGR
IAEVCIKLND VVKEGQLLFV LEKNA
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