| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2948 |
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| Symbol | |
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| ID | 5540438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3824316 |
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| End bp | 3824558 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895068 |
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| Product | FmdB family regulatory protein |
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| Protein accession | YP_001433027 |
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| Protein GI | 156742898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.827957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00103646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCATTGT ACACCTACAC CTGCCCGGAG TGTGAGATCG AAATCGAAGA ACTCCGCCCT
TCCTGGCGCG CCGATGAGCC GGTCGAATGT CCGGTCTGCC ACGGGCTGTG CGTGCGCGAT
TGGAGCAGTT TCAGCATTCG GTCGCGCAAT GCGCCCAAGC CGGTCTACGC CAGCCCGGCA
CAGGTTGCGC GGGCGCTCCA CGGTCCCGGT TGCCCCTGCT GCATCCCGCG CCGGCGATCA
TGA
|
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| Protein sequence | MPLYTYTCPE CEIEIEELRP SWRADEPVEC PVCHGLCVRD WSSFSIRSRN APKPVYASPA
QVARALHGPG CPCCIPRRRS
|
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