| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2930 |
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| Symbol | |
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| ID | 5540420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3797073 |
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| End bp | 3802811 |
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| Gene Length | 5739 bp |
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| Protein Length | 1912 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895051 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001433010 |
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| Protein GI | 156742881 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0842557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TCGAATCGGC TCTTCGCCCG CCACGCATCA ATCCGGTGCG CACCCGCGCC
GACTGGGAGG CGCAACGTAA GGCTGCGCTC ACCGATCCGG GCGCGTTCCA TGGCGCAATC
GCTCGTAGCG CCATTCACTG GTACGACCGT CATCTTGACG CCTGGATCAC CTGGGACGAA
GAGGAGGGTT GCTGGAAGGG ACTGCGTTAC AGCGACGGCG CACCGATCGA CGTGCCCTAC
GGACCGGATC ACGAACCGTG GGAGCGCGCC TTCAACGGCG ATGATCCGCC CTTCTATCGC
TGGTTTGAAG GCGGGTTGAC CAACGCTTGC TTCAATGAGG TCGATCGCCA CGTGCTGACA
GGCTATGGCG ACGAGGTGGC GTTCTACTTC GAGGGTGACC GCTGGGACTC GTCGCTCAAC
AACGGGCGCG GTGGTCCGGT CGTCAGTTTT GCCGTGACGC GCAAGCAATT GATGCTCGAA
GTTGTCAAGG CGGCGCAGGT GTTGCGCGAT CTGGGACTGA ACATGGGTGA TCGCATCGCC
CTCAACATGC CCAACATCAT GGAGCAACTC TACTATACCG AAGCCGCCAA GCGCCTGGGC
ATCATTTACA CGCCGGTGTT CGGCGGTTTC TCCGACAAGA CCCTCAGCGA CCGCATCCAC
AATGCGGGCG CGCGCCTGGT GATCACCAGC GATGGCGCCT ATCGCAATGC GCAGGTCGTT
CCCTATAAAG AGCAGTATAC CGATCAGGCG CTCGATAAGT TCGTGCCGGT CGAGACCGCG
CTGGACATCA TCGAGGCGGC GCTCAGCGGC AGCGAGGGTT CGCCCGTGCC GGGCGCACCG
CTGCTGGCGC CGGATCAGAT CAAGCATATT CTGGCGCAGG TGCGCGACGC GCTCAAAGAA
GACATCACCA TTGAGCGCAG CGACGCAATG CGCGCCGTCG GACGCGCTAT CGAGGGACTC
ACCGGCGTTG ATGCCCTGGC ACAGTCGCGC GCGCGCACCG CTGTCGCACA GGCGCTGGTT
AATACGCCGC CGCGCGTCGA TGCAGTGATC GTCGTGCGCC ATACCGGACA GGATATTCTG
TGGCGACCGG AACGCGATCG CTGGAGTCAT GAACTGACTG CCAGGGCGCT GGAGACGATC
CTGGCAAATG CGCGCGCCGT CGGCGTCGAG GTCTACAGCG AAGATGAACT CCTCAACTTG
CCGACCGATC AGTTCGTGAA GGCGCTGTAC GCAACCAGCC GCGCCGAACC GCTCGATGCG
GAATATCCGA TGTTCATCAT CTATACGTCG GGCAGCACCG GCAAGCCCAA GGGAGTGGTT
CACGTCCACG GCGGGTATGT CGCCGGCGTC GCCTATACCA TGAGGGTCAG TTTCGACGCC
GAACCGGGTG ATACGATCTA CGTCGTCGCC GATCCGGGCT GGATCACAGG GCAGAGTTAT
ATGATCTGCG CCACGCTGAC GACTCGCTGC ACCGGCATTA TTACCGAAGG CTCGCCGGTC
TTCCCGTCCG CCGGGCGCTT TGCCAGCATT ATCGAGCGCT ACAAGGTGCG CATCTTCAAA
GCAGGCGTGA CCTTCCTCAA GACGGTGATG TCCGACCCGC AGAATACCGC AGATGCGCGT
CAGTACGATA TGTCGTCGCT GCGCGTCTGC ACCTTCTGCG CCGAACCGGT CAGTCCTGCC
GTACAGCAGT TCGGCATGGA ATTGATGTCG CCGCAGTATA TTAACTCCTA CTGGGCAACT
GAGCACGGCG GCATTGTCTG GACGCACTTC TACGGCAATG AGGATTTCCC GCTGCGCCCC
GACGCGCATA CCTATCCGCT GCCCTGGATC GCTGGTGAGG TCTGGGTGCT CGAAGGCGGC
GACCGTGATG CAACCGGCGC CGAAGCGCCA CGTTATCGCA TCGCCGACTA TGAGGAGAAG
GGTGAGATCG TTATTACGGC GCCGTATCCG TATCTGACGC GCACCATCTG GGGCGACGTG
AAAGGATTCG AGGCGTGGGT CGCCGCCATG CAGCACGGGA ACGGCGCAAC TGCGCCGCGC
TGGCGCGGCG ATGCCGAACG CTTTATCAAG ACCTACTGGC GGCGCGGTCC CAACGACGAG
TGGGGGTATA TCCAGGGCGA CTTCGCCATG AAGTACCCCG ACGGCTCGTT CACGCTGCAC
GGTCGTTCCG ACGATGTCAT CAACGTGTCG GGGCACCGTA TGGGCACCGA GGAGATCGAA
GGCGCCATTT TGCGCGACAA AATTATCACG CCGGACTCGC CGGTCGGCAA CTGTATTGTG
GTCGGCGCGC CACACCGCGA GAAAGGTTTG ACGCCGGTGG CGTTCATTCT GACGGCGCCG
GGGCGCAAGT TGACCGGTGA AGATCGCCGC CGCCTCAACG AACTGGTGCG CAACGAAAAG
GGCGCCGTCA GCGTTCCGGA AGACTATATC GAGGTCAGCG CCTTCCCGGA GACGCGCTCC
GGCAAGTATA TGCGGCGCTT CCTGCGCAAT CTAATGCTCG GTGAGCCGCT TGGCGACACC
ACCACGCTGC GCAATCCCGA GTCGCTGAAG GAGATTGCGG AGAAGATCGA AGCGTGGAAG
CGCAAGCAGC GCATGGCGGA GGAGCAGCGC ATCTTCGAGC GCTATCGCTA CTTCCGCATC
GAGTACCATG CCGTGCGTGA GCGGTGGACG CCTTCGGGCA ACGGAAGTGC GGCGGCGGAA
CAGAAGGCGC TGACGCAGCG GATTGCCATT GTGACCGTCA CCAATCCACC GGTCAATGCG
CTCAACGAGC GCGCCCTCGA TGAGCTCAAC ACTATCGTCG ATCACCTGGC GCGGCGTGAG
GATGTGGCAG CGGTCGTCTT CACCGGCAGC GGCACGAAGA GTTTTGTGGC GGGCGCCGAC
ATCAAGCAGA TGCTCGAAGA GATGCACACC GTTGAGGACG CGATGGCGTT GCCGAACAAT
GCGCACCTGG CGTTCCGCAA GATCGAAACG ATGAACAAGC CATGTATCGC GGCGATCAAC
GGCGTGGCGC TCGGCGGCGG CATGGAGTTC GCGCTCGCCT GCCACTATCG CATTGCCGAC
CTGCACGCCG AGTTTGGGCA ACCGGAGATT AATCTGCGGT TGCTGCCGGG ATACGGCGGT
ACGCAACGCT TGCCACGCCT GCTCTACAGC CGCCGCGGTG AAGCCGGTCT GATCAAGGCG
CTGATGATCA TTATGGGCGG GCGCACTCTG AATGCCGAGC GCGCGTATGA GATCGGGCTG
ATTGATAAAG TGGCGCACGG TCACGAAGAG GCGCTCACCC TCGCCACGCA GATGGCGCGT
GAGATGATCC TGGCGGAGCG CAACGGCAAA CCGACCGAAC TCCGTGTTAT TCCCAACACA
TCGGATGATC CGACGACGTT CTTCTCGCCG TTCCACGACC CGGCAACGGC TGGCGAGGGT
CTGTGGCCCC CGCTGCCCGA AGCCTATGCG CTGCGCCGCC AGTTGACGGC ACAGTGGGAA
ACGCCCGATC CGGCGATGGT GGACCTGCTC GAGAAGGCGC TGCGCGATCC GCTGATCACA
CGCATTATCA ACCAGGCGCA GTGGGCCGGA CGAGCCAGGG CGATTGAGCG GATCATCGAC
GCGTTGCGCA CCGGCTTCAC CAAAGGCATG CTGGCAGGGC TGGAGCGTGA GGCGCGCCTG
TTCGCCGAAG CGGTGGTCGC TCCCGATGAA GGCAAGATTG GCATTCAGGA CTTCCTGGAC
AAGCGCAGCG CACCATTGCC GACGCGCCGC CGCATCCACC TGACGCCCGA CGAGGAGAAG
CGCATGATCG ACGCCGGTAT GCTTTTGCCG ATTGGCGCGC CATTCTTCCC CGGCGTGACG
CCCATTCCGG TGGCGCAGTA CGCGATGGCG GTGGTGCGCG ATGAGGTCAC CGGCGCGCCG
GCCCACGGTG ATCCGATTGA GGCGGAAAAG CAGATCATCA TCCCGGTCGA AAAACCCGGA
CCAAACGACG TTCTGCTCTA CATTCTGGCA TCGGAGGTCA ACTTCAACGA CATCTGGGCG
ATCACCGGCG TGCCGGTCAG TCAGTTCGAC GAGCACGACC GCGACTGGCA CGTGACCGGA
TCAGGCGGGA TCGGGCTGAT CGTCTCGGTC GGCGAAGAGA CGAAGCGCGA GGGGCGCCTG
AAGGTCGGCG ATCTGGTAGC GATCTACTCC GGTCAAAACG ATCTACTGTC GCCCATGGTC
GGACTTGATC CGATGGCGGC GGATTTCGTC ATCCAGGGGT ATAACACGCC TGATGCGTCG
CACCAGCAGT TCATGGTGGC GCAGGCGCCG CAGTGTTTCC CGGTGCTGCC CGACCTGACC
CTCGAGGCTG CCGGGTCGTA TATGTTGAAC CTGGGGACGG TCTATCGCGC ATTGTTTACC
ACACTCAAGA TTCAGCCGGG ACGACGTATT TTCGTCGAGG GTGCGGCAAC CGGCACCGGT
CTTGATGCCG CGCGCTCGGC GGCGCGCAAT GGGTTGTATG TCACCGGCAT GGTCAGTTCG
CAGGAGCGCG CAGCGGTTGT GCGCGCGGCT GGAGCAGTTG GTGTGATCAA TCGCCGTGAT
CCACGCTATG CTGGCATCTT TACCCGCGTG CCGGAAGATC CGGCGAAATG GGCGGAATGG
GAAGCCGCCG GTCGTCCACT GCTCGAAGAC TATCGGGCGC AGAACGGAGG GCACCTGGCG
GATTACGCCG TCTCGCACGC TGGCGAAACG GCATTCCCGC GCAGCTTCCA GTTGCTTGGC
GAGCCGCACG ATGGGCATAT TCCGACACTG ACGTTCTATG GTGCATCGAG CGGCTACCAC
TTCACCTTCC TTGGCAAGCC GGGCGCCGCC GATCCGGTGG AGATGCTGCG CCGGGCAGGG
TTACGCGCCG GTGAAGCCGT GATGATTTAC TATGGCGTCG ATGACCGGTC GTACCTGGGT
GACGAGGGGT ATGAATCGGG CGCTGTGCCG GAGACCCTGG AACGCCGCAC AACCCTCGTC
GATCAGGTCG GGTTGGAGGC GATTGAATCG GCGCGCGCGA TGGGCGCGCG GATCGTGGTG
GTCACCTACA CTGATGCACA ACGCGAATTC GTGTTGAGCC TGGGCTTCGG CGCGTCGCTC
AAGGGCGTTG TGAGCCTGGA AGAGTTGCAT CGCCGCTATG GTGATGAGTT CGATTGGCCC
GAAACCATGC CACCGCTGCC CGACGCAAAG AGCGATATCC ATGGGTTCAA GGCGGCAGTG
CGGCGCTTCA ACGACCTGAC GTTCAAGCCG CTGGGTACGG CAGTCGGGCA GTTCCTGCGC
AGCAACGACA ACCCGCGCGG GTACCCCGAT TTGATCATCG AGCGTTCTGG TCACGACACG
CTGGCGGTGA GCGTTATGCT GATCAAACCC TTCACCGGTC GTGTCGTCTA CTTCGAGAAC
ATGGACGGGC AGCGCTACTC ATTCTTCGCT CCGCAGGTCT GGATGCGTCA GCGCCGGATC
TATATGCCAA CGGCGAATAT CTGGGGCACG CACCTCTCGA ACGCCTATGA GATTGTGCGC
CTGAACGATG AGATCAGCGC CGGTCTGCTG AGCATCACCG AACCGACGCT CGTGGAGTGG
AACGATCTCC CGCAGGCGCA CCAGGCAATG TGGGAGAATC GTCACCAGGG AGCGACCTAT
GTCGTCAACC ATGCCCTGCC GCGCCCTGGG CTCAAGGATA AGGACGAATT GTATGAGGCG
TGGTCTGAGA TGCTCCAGAA TCGGGAATAT GGGGTATAA
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| Protein sequence | MTTIESALRP PRINPVRTRA DWEAQRKAAL TDPGAFHGAI ARSAIHWYDR HLDAWITWDE
EEGCWKGLRY SDGAPIDVPY GPDHEPWERA FNGDDPPFYR WFEGGLTNAC FNEVDRHVLT
GYGDEVAFYF EGDRWDSSLN NGRGGPVVSF AVTRKQLMLE VVKAAQVLRD LGLNMGDRIA
LNMPNIMEQL YYTEAAKRLG IIYTPVFGGF SDKTLSDRIH NAGARLVITS DGAYRNAQVV
PYKEQYTDQA LDKFVPVETA LDIIEAALSG SEGSPVPGAP LLAPDQIKHI LAQVRDALKE
DITIERSDAM RAVGRAIEGL TGVDALAQSR ARTAVAQALV NTPPRVDAVI VVRHTGQDIL
WRPERDRWSH ELTARALETI LANARAVGVE VYSEDELLNL PTDQFVKALY ATSRAEPLDA
EYPMFIIYTS GSTGKPKGVV HVHGGYVAGV AYTMRVSFDA EPGDTIYVVA DPGWITGQSY
MICATLTTRC TGIITEGSPV FPSAGRFASI IERYKVRIFK AGVTFLKTVM SDPQNTADAR
QYDMSSLRVC TFCAEPVSPA VQQFGMELMS PQYINSYWAT EHGGIVWTHF YGNEDFPLRP
DAHTYPLPWI AGEVWVLEGG DRDATGAEAP RYRIADYEEK GEIVITAPYP YLTRTIWGDV
KGFEAWVAAM QHGNGATAPR WRGDAERFIK TYWRRGPNDE WGYIQGDFAM KYPDGSFTLH
GRSDDVINVS GHRMGTEEIE GAILRDKIIT PDSPVGNCIV VGAPHREKGL TPVAFILTAP
GRKLTGEDRR RLNELVRNEK GAVSVPEDYI EVSAFPETRS GKYMRRFLRN LMLGEPLGDT
TTLRNPESLK EIAEKIEAWK RKQRMAEEQR IFERYRYFRI EYHAVRERWT PSGNGSAAAE
QKALTQRIAI VTVTNPPVNA LNERALDELN TIVDHLARRE DVAAVVFTGS GTKSFVAGAD
IKQMLEEMHT VEDAMALPNN AHLAFRKIET MNKPCIAAIN GVALGGGMEF ALACHYRIAD
LHAEFGQPEI NLRLLPGYGG TQRLPRLLYS RRGEAGLIKA LMIIMGGRTL NAERAYEIGL
IDKVAHGHEE ALTLATQMAR EMILAERNGK PTELRVIPNT SDDPTTFFSP FHDPATAGEG
LWPPLPEAYA LRRQLTAQWE TPDPAMVDLL EKALRDPLIT RIINQAQWAG RARAIERIID
ALRTGFTKGM LAGLEREARL FAEAVVAPDE GKIGIQDFLD KRSAPLPTRR RIHLTPDEEK
RMIDAGMLLP IGAPFFPGVT PIPVAQYAMA VVRDEVTGAP AHGDPIEAEK QIIIPVEKPG
PNDVLLYILA SEVNFNDIWA ITGVPVSQFD EHDRDWHVTG SGGIGLIVSV GEETKREGRL
KVGDLVAIYS GQNDLLSPMV GLDPMAADFV IQGYNTPDAS HQQFMVAQAP QCFPVLPDLT
LEAAGSYMLN LGTVYRALFT TLKIQPGRRI FVEGAATGTG LDAARSAARN GLYVTGMVSS
QERAAVVRAA GAVGVINRRD PRYAGIFTRV PEDPAKWAEW EAAGRPLLED YRAQNGGHLA
DYAVSHAGET AFPRSFQLLG EPHDGHIPTL TFYGASSGYH FTFLGKPGAA DPVEMLRRAG
LRAGEAVMIY YGVDDRSYLG DEGYESGAVP ETLERRTTLV DQVGLEAIES ARAMGARIVV
VTYTDAQREF VLSLGFGASL KGVVSLEELH RRYGDEFDWP ETMPPLPDAK SDIHGFKAAV
RRFNDLTFKP LGTAVGQFLR SNDNPRGYPD LIIERSGHDT LAVSVMLIKP FTGRVVYFEN
MDGQRYSFFA PQVWMRQRRI YMPTANIWGT HLSNAYEIVR LNDEISAGLL SITEPTLVEW
NDLPQAHQAM WENRHQGATY VVNHALPRPG LKDKDELYEA WSEMLQNREY GV
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