Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2926 |
Symbol | |
ID | 5540416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3790230 |
End bp | 3790826 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895047 |
Product | hypothetical protein |
Protein accession | YP_001433006 |
Protein GI | 156742877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0687011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.364425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTAG CACTGACTAT GCTTGGTATT CTTGCCATTT GCGCAGCCCT GGTGCTGCCC GATGTATCGT ATGCTCGTCC GCAGCAGATC GAAACTCCTG TCACGGTCAC CGGCACGGTC ACCGATTTCA AATATGGACG ACGCGGTGAG GTTGAGGGTT TCTACCTCGA TAATGGAACC GAAGTTCGCT TCCCGGAGCA TCGCGCCTGG GAAGTGACGC AGGCGGTAAC GATAGGAACA CCGGTGCGGG TCGAAGGTTC TGAGCGGGTA GGTCGGCGTG GTGATGTGCA TGTGAAAGCG CAGGTGATTA CGAACACCAA CACGAATACT CGTGTGGTCA TCGAGGAAGT CGTGAATGTC GGCGGTCAGA TTGTTGAGGT TACCTACAGT CGGAGTGGTC GAGTGAACGG TTTCGTGCTC AACACCGGAG ATGTGGTGCG CACGCCGCCT CCTTTGGCGC GCGCGCTCGC CGCGCTGCCG GCGGATGCGT CGGTGCAAGT GATTGGCGTG CGGCGCATTG ACAAAAACGG CGAGGAGCAT ATTAAGCCGG ATACCATCAC GAATCGTGCC ACCGGCAGGG TTATCTGGAG CCGATAA
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Protein sequence | MRVALTMLGI LAICAALVLP DVSYARPQQI ETPVTVTGTV TDFKYGRRGE VEGFYLDNGT EVRFPEHRAW EVTQAVTIGT PVRVEGSERV GRRGDVHVKA QVITNTNTNT RVVIEEVVNV GGQIVEVTYS RSGRVNGFVL NTGDVVRTPP PLARALAALP ADASVQVIGV RRIDKNGEEH IKPDTITNRA TGRVIWSR
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