Gene Rcas_2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2926 
Symbol 
ID5540416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3790230 
End bp3790826 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content58% 
IMG OID640895047 
Producthypothetical protein 
Protein accessionYP_001433006 
Protein GI156742877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0687011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.364425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTAG CACTGACTAT GCTTGGTATT CTTGCCATTT GCGCAGCCCT GGTGCTGCCC 
GATGTATCGT ATGCTCGTCC GCAGCAGATC GAAACTCCTG TCACGGTCAC CGGCACGGTC
ACCGATTTCA AATATGGACG ACGCGGTGAG GTTGAGGGTT TCTACCTCGA TAATGGAACC
GAAGTTCGCT TCCCGGAGCA TCGCGCCTGG GAAGTGACGC AGGCGGTAAC GATAGGAACA
CCGGTGCGGG TCGAAGGTTC TGAGCGGGTA GGTCGGCGTG GTGATGTGCA TGTGAAAGCG
CAGGTGATTA CGAACACCAA CACGAATACT CGTGTGGTCA TCGAGGAAGT CGTGAATGTC
GGCGGTCAGA TTGTTGAGGT TACCTACAGT CGGAGTGGTC GAGTGAACGG TTTCGTGCTC
AACACCGGAG ATGTGGTGCG CACGCCGCCT CCTTTGGCGC GCGCGCTCGC CGCGCTGCCG
GCGGATGCGT CGGTGCAAGT GATTGGCGTG CGGCGCATTG ACAAAAACGG CGAGGAGCAT
ATTAAGCCGG ATACCATCAC GAATCGTGCC ACCGGCAGGG TTATCTGGAG CCGATAA
 
Protein sequence
MRVALTMLGI LAICAALVLP DVSYARPQQI ETPVTVTGTV TDFKYGRRGE VEGFYLDNGT 
EVRFPEHRAW EVTQAVTIGT PVRVEGSERV GRRGDVHVKA QVITNTNTNT RVVIEEVVNV
GGQIVEVTYS RSGRVNGFVL NTGDVVRTPP PLARALAALP ADASVQVIGV RRIDKNGEEH
IKPDTITNRA TGRVIWSR