| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2922 |
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| Symbol | |
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| ID | 5540412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3784819 |
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| End bp | 3785595 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895043 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001433002 |
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| Protein GI | 156742873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.557002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.914332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC GCCGCGTCAT TCCGTGTCTG GATGTCAAGG CAGGTCGGGT GGTCAAGGGC
GTCGCCTTTC TGAACCATCG AGATGCTGGC GATCCCGTCG AACTCGCCGC AGCCTATGAT
GCGGGCGGCG CCGATGAACT GGTGTTCTAC GACATTACCG CCAGCAGCGA CGAACGCGAT
ATTATGATCG ATGTCGTCGA ACGCACTGCG GCGCAGGTGT TCATTCCATT AACAGTCGGC
GGCGGGTTGC GCACGGTCGA GGATATGTAC CGCATGTTGC GCGCCGGCGC CGATAAAGTG
TCGATCAACA CGGCGGCGGT GCTCAACCCG CAATTGATCG AAGATGGCGC GCGACGGTTC
GGCAGCCAGT GTATCGTGCT CTCCATCGAT GCCCGGCGGG TCAACGCGCC GGACGAACCG
CCGCGCTGGC AGGTCTTTAC TCATACCGGT CATAACCCGC GCCCGACCGG TCTCGACGCT
GTCGAATGGG CGCGACGCGG CGTTGATCTG GGGGCAGGCG AGATCGTCAT CAACAGCATG
GATGCTGATG GCGTCGGCAG CGGGTATGAT CTCGATCTCC TGCGCGCCAT TGCGGATGCA
GTCGGTGTGC CGGTCATTGC GTCCGGCGGC GTCGGCTCCC CGGAACACAT GTACGCCGGT
CTCGTCGAGG GGTGCGCCGA TGCCGTGCTC GCGGCGTCGA TCTTCCACTT CGGTGCGTAT
ACCATTCAAG ATGTCAAACG ATATCTGGCA GAGCGCGGGG TGCCGGTGCG TATGTAG
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| Protein sequence | MLKRRVIPCL DVKAGRVVKG VAFLNHRDAG DPVELAAAYD AGGADELVFY DITASSDERD
IMIDVVERTA AQVFIPLTVG GGLRTVEDMY RMLRAGADKV SINTAAVLNP QLIEDGARRF
GSQCIVLSID ARRVNAPDEP PRWQVFTHTG HNPRPTGLDA VEWARRGVDL GAGEIVINSM
DADGVGSGYD LDLLRAIADA VGVPVIASGG VGSPEHMYAG LVEGCADAVL AASIFHFGAY
TIQDVKRYLA ERGVPVRM
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