Gene Rcas_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2883 
Symbol 
ID5540372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3741630 
End bp3742124 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID640895003 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_001432963 
Protein GI156742834 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC TGAGCATTAC AATCGATGGT CATACGTTTG TCGTCGAATC TCCGCCGTTG 
CACCGAACCA CCGGCGCGAT CACCGTGCGG GTCGATGGGC AGTCGGTTCA GGTGCTGACA
CCGGAAACCG GCAGTCCAGA ACTGCTCGAC TGGCTGATTG TAGAGAGGCG ACCGTATGAG
GTGGCGGTCG ATCCCAATCT GCGCTGGATG CGCTCGCGGT TTGGTCTGCA CCAGGTTGAA
GTGCGCGATC TGGAAGCCAC GGTTGCGCGC CCGGCAAGCG GCGATGGGCG CATCAAAGCG
CCAATTCCAG GATTGATCAC GCGCGTGCTC GTCAGCCCTG GCGAAGCGGT CGAACTCGGG
CAACCGCTGC TGGTGCTGGA AGCGATGAAG ATGGAGAACG AAATCCGCGC GCCACGCGCC
GGTCGCGTAA CGCAGATCCA CGTCGCACCC GGTCAGAGCG TCGCGCTCGG CGTTGTGATG
GCGGAAGTGG AGTAA
 
Protein sequence
MSKLSITIDG HTFVVESPPL HRTTGAITVR VDGQSVQVLT PETGSPELLD WLIVERRPYE 
VAVDPNLRWM RSRFGLHQVE VRDLEATVAR PASGDGRIKA PIPGLITRVL VSPGEAVELG
QPLLVLEAMK MENEIRAPRA GRVTQIHVAP GQSVALGVVM AEVE