Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2883 |
Symbol | |
ID | 5540372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3741630 |
End bp | 3742124 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895003 |
Product | biotin/lipoyl attachment domain-containing protein |
Protein accession | YP_001432963 |
Protein GI | 156742834 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC TGAGCATTAC AATCGATGGT CATACGTTTG TCGTCGAATC TCCGCCGTTG CACCGAACCA CCGGCGCGAT CACCGTGCGG GTCGATGGGC AGTCGGTTCA GGTGCTGACA CCGGAAACCG GCAGTCCAGA ACTGCTCGAC TGGCTGATTG TAGAGAGGCG ACCGTATGAG GTGGCGGTCG ATCCCAATCT GCGCTGGATG CGCTCGCGGT TTGGTCTGCA CCAGGTTGAA GTGCGCGATC TGGAAGCCAC GGTTGCGCGC CCGGCAAGCG GCGATGGGCG CATCAAAGCG CCAATTCCAG GATTGATCAC GCGCGTGCTC GTCAGCCCTG GCGAAGCGGT CGAACTCGGG CAACCGCTGC TGGTGCTGGA AGCGATGAAG ATGGAGAACG AAATCCGCGC GCCACGCGCC GGTCGCGTAA CGCAGATCCA CGTCGCACCC GGTCAGAGCG TCGCGCTCGG CGTTGTGATG GCGGAAGTGG AGTAA
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Protein sequence | MSKLSITIDG HTFVVESPPL HRTTGAITVR VDGQSVQVLT PETGSPELLD WLIVERRPYE VAVDPNLRWM RSRFGLHQVE VRDLEATVAR PASGDGRIKA PIPGLITRVL VSPGEAVELG QPLLVLEAMK MENEIRAPRA GRVTQIHVAP GQSVALGVVM AEVE
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