Gene Rcas_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2881 
Symbol 
ID5540370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3738582 
End bp3740126 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content60% 
IMG OID640895001 
Productcarboxyl transferase 
Protein accessionYP_001432961 
Protein GI156742832 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTA TGCAGGAGTA TATCGAGAAA CTGCGCCAGC GCAAAGCAAT TGCCCACGGC 
ACGGCGCAGG ATGCCGAAGC GCAGCACAAA AAAGGGCGGC TCACCGCGCG TGAGCGCATC
GACCTGCTCT TCGATCCAGG AACATTCGAA GAGATTGACA CCCTGGTGCT GCCACGCTAC
GACGTGTACC CCGGCGGAAA ACGCTCCCGG TACGGCGATG GCGTCGTCAC CGGTTTCGGG
CTGATCAACG GGCGTCGCGC GTTTGTGGCA GCGCAGGATG CTTCGGTCAT GGGCGGTTCG
CTCGGCGAAA TGCATGCCAA CAAAATCGTT AAGGCGATGC ACATGGCTTT GAAGTATGGC
TGTCCCTTCA TCGCTATCAA CGACTCCGGC GGCGCGCGCA TTCAGGAAGG GGTCGATAGC
CTGGGCGGCT ATGCGCGCAT CTTCGACGCG AACTGCGAAG CGTCCGGCGT CATTCCGCAA
CTCTCGTTGA TCATGGGACC ATGCGCTGGC GGTGCGGTCT ATTCACCGGC GCTAACCGAT
TTCATCTTCA TGACCGAGAA TGCCTATATG TTCATCACCG GTCCTGAAGT GGTGAAAGCC
GTTATGCAGG AGGAGGTTAC GCAGGATCAA TTGGGCGGCG GGCGCGTCCA TGCCGAGGAG
AGCGGCGTGA GCCACTTCCT GGCGCGCGAC GATCAGGAGT GCCTGGCGAT GGCGCGTGAA
CTTCTGAGTT ACCTGCCGCT CAACAACCAG GACGACCCGC CCTATGTGCG CCCGGTGGAC
GATCCTGAAC GACGCTGCCC TGAACTCGAA GAGATCGTGC CGGTCGATCC GACCAAGCCT
TACGATGTGC GCCAGGTGAT CAGCAGCATC CTCGACGATG GCCGCTTCTT TGAGGTGCAT
GCGCTTTGGG CGCAGAACAT GGTCGTTGGC TTCGGCAGGC TCAACGGCTA TGTTGTCGGC
ATTGTCGCCA ACCAACCGAT GGTGCTGGCA GGCTGCATCG ACATCAAGGC GTCGATCAAG
GCGGCACACT TCATTCGCAT TTGCGATACC TACAATGTTC CAATCATCAC GTTGCAGGAC
GTTCCCGGCT TCCTGCCCGG CACGAACCAG GAGTACGGCG GCATCATCCG CAACGGCGCG
CGTATGATCT ACGCCTATTC CGAAGCCGTC GTCCCCAAAC TGATGATCAT TCTGCGCAAA
AGTTACGGCG GCGCCTACTG CGTGATGAGC AGCAAGGGAT TGCGCGGCGA CCTGTTGTAC
GCCTGGCCCA ACGCCGAACT CGCCGTAATG GGGGCGGCCG GCGCAGTGAA CATCCTGTAC
CGTAATGAGG TCAAGAACGC CCCCGACCCG GAGGCAAAGC GCCGCGAACT GGTCGAAGAG
TACCAGGAAC GCTTCAACAA CCCGTATGTT GCGGCTGCCC GCGGGTTGAT CGACGATGTA
ATCGAGCCGC GCGACTCGCG TCGAGTGCTG ATCAAGGCGC TAGAAGTCAC CCTGTCGAAG
CGTGAACGTC ACGTGCCGCG CAAGCACGGT ATCTCGCCGT CCTGA
 
Protein sequence
MTSMQEYIEK LRQRKAIAHG TAQDAEAQHK KGRLTARERI DLLFDPGTFE EIDTLVLPRY 
DVYPGGKRSR YGDGVVTGFG LINGRRAFVA AQDASVMGGS LGEMHANKIV KAMHMALKYG
CPFIAINDSG GARIQEGVDS LGGYARIFDA NCEASGVIPQ LSLIMGPCAG GAVYSPALTD
FIFMTENAYM FITGPEVVKA VMQEEVTQDQ LGGGRVHAEE SGVSHFLARD DQECLAMARE
LLSYLPLNNQ DDPPYVRPVD DPERRCPELE EIVPVDPTKP YDVRQVISSI LDDGRFFEVH
ALWAQNMVVG FGRLNGYVVG IVANQPMVLA GCIDIKASIK AAHFIRICDT YNVPIITLQD
VPGFLPGTNQ EYGGIIRNGA RMIYAYSEAV VPKLMIILRK SYGGAYCVMS SKGLRGDLLY
AWPNAELAVM GAAGAVNILY RNEVKNAPDP EAKRRELVEE YQERFNNPYV AAARGLIDDV
IEPRDSRRVL IKALEVTLSK RERHVPRKHG ISPS