Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2881 |
Symbol | |
ID | 5540370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3738582 |
End bp | 3740126 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895001 |
Product | carboxyl transferase |
Protein accession | YP_001432961 |
Protein GI | 156742832 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGTA TGCAGGAGTA TATCGAGAAA CTGCGCCAGC GCAAAGCAAT TGCCCACGGC ACGGCGCAGG ATGCCGAAGC GCAGCACAAA AAAGGGCGGC TCACCGCGCG TGAGCGCATC GACCTGCTCT TCGATCCAGG AACATTCGAA GAGATTGACA CCCTGGTGCT GCCACGCTAC GACGTGTACC CCGGCGGAAA ACGCTCCCGG TACGGCGATG GCGTCGTCAC CGGTTTCGGG CTGATCAACG GGCGTCGCGC GTTTGTGGCA GCGCAGGATG CTTCGGTCAT GGGCGGTTCG CTCGGCGAAA TGCATGCCAA CAAAATCGTT AAGGCGATGC ACATGGCTTT GAAGTATGGC TGTCCCTTCA TCGCTATCAA CGACTCCGGC GGCGCGCGCA TTCAGGAAGG GGTCGATAGC CTGGGCGGCT ATGCGCGCAT CTTCGACGCG AACTGCGAAG CGTCCGGCGT CATTCCGCAA CTCTCGTTGA TCATGGGACC ATGCGCTGGC GGTGCGGTCT ATTCACCGGC GCTAACCGAT TTCATCTTCA TGACCGAGAA TGCCTATATG TTCATCACCG GTCCTGAAGT GGTGAAAGCC GTTATGCAGG AGGAGGTTAC GCAGGATCAA TTGGGCGGCG GGCGCGTCCA TGCCGAGGAG AGCGGCGTGA GCCACTTCCT GGCGCGCGAC GATCAGGAGT GCCTGGCGAT GGCGCGTGAA CTTCTGAGTT ACCTGCCGCT CAACAACCAG GACGACCCGC CCTATGTGCG CCCGGTGGAC GATCCTGAAC GACGCTGCCC TGAACTCGAA GAGATCGTGC CGGTCGATCC GACCAAGCCT TACGATGTGC GCCAGGTGAT CAGCAGCATC CTCGACGATG GCCGCTTCTT TGAGGTGCAT GCGCTTTGGG CGCAGAACAT GGTCGTTGGC TTCGGCAGGC TCAACGGCTA TGTTGTCGGC ATTGTCGCCA ACCAACCGAT GGTGCTGGCA GGCTGCATCG ACATCAAGGC GTCGATCAAG GCGGCACACT TCATTCGCAT TTGCGATACC TACAATGTTC CAATCATCAC GTTGCAGGAC GTTCCCGGCT TCCTGCCCGG CACGAACCAG GAGTACGGCG GCATCATCCG CAACGGCGCG CGTATGATCT ACGCCTATTC CGAAGCCGTC GTCCCCAAAC TGATGATCAT TCTGCGCAAA AGTTACGGCG GCGCCTACTG CGTGATGAGC AGCAAGGGAT TGCGCGGCGA CCTGTTGTAC GCCTGGCCCA ACGCCGAACT CGCCGTAATG GGGGCGGCCG GCGCAGTGAA CATCCTGTAC CGTAATGAGG TCAAGAACGC CCCCGACCCG GAGGCAAAGC GCCGCGAACT GGTCGAAGAG TACCAGGAAC GCTTCAACAA CCCGTATGTT GCGGCTGCCC GCGGGTTGAT CGACGATGTA ATCGAGCCGC GCGACTCGCG TCGAGTGCTG ATCAAGGCGC TAGAAGTCAC CCTGTCGAAG CGTGAACGTC ACGTGCCGCG CAAGCACGGT ATCTCGCCGT CCTGA
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Protein sequence | MTSMQEYIEK LRQRKAIAHG TAQDAEAQHK KGRLTARERI DLLFDPGTFE EIDTLVLPRY DVYPGGKRSR YGDGVVTGFG LINGRRAFVA AQDASVMGGS LGEMHANKIV KAMHMALKYG CPFIAINDSG GARIQEGVDS LGGYARIFDA NCEASGVIPQ LSLIMGPCAG GAVYSPALTD FIFMTENAYM FITGPEVVKA VMQEEVTQDQ LGGGRVHAEE SGVSHFLARD DQECLAMARE LLSYLPLNNQ DDPPYVRPVD DPERRCPELE EIVPVDPTKP YDVRQVISSI LDDGRFFEVH ALWAQNMVVG FGRLNGYVVG IVANQPMVLA GCIDIKASIK AAHFIRICDT YNVPIITLQD VPGFLPGTNQ EYGGIIRNGA RMIYAYSEAV VPKLMIILRK SYGGAYCVMS SKGLRGDLLY AWPNAELAVM GAAGAVNILY RNEVKNAPDP EAKRRELVEE YQERFNNPYV AAARGLIDDV IEPRDSRRVL IKALEVTLSK RERHVPRKHG ISPS
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