Gene Rcas_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2822 
Symbol 
ID5540309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3659528 
End bp3659968 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID640894949 
Productphage tail protein 
Protein accessionYP_001432911 
Protein GI156742782 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA AAGACCCTCT GATTTCAGCA TGGTTCGGCG TTGATTTCGG TGACGGCGTC 
GTGGGCGCCT TCCGCGAATG TACCGGTCTC GGCAGCGAGA ACGAAGTGGT CGAGAGCAAA
GCCAGCGGAC CCGACGGGAA GTACATCATC AAGAAAATCC CCGGTCGCAT GAAATGGAAC
AACGTCACTC TCAAACGCGG CATCACCGAC GCCATGGACA TGTGGAAATG GCGCAAGATG
GTCGAAGAGG GAGATATTCA GGGAGCGCGG CGCAACGGCA CGATTACCAT GTTCAACACC
AAAGGCGAAC CGGTCGCGCG CTGGAAATTC GTCAACGCAT GGCCCAGCAA GTTAACCGGA
CCGGACGCCA ACGCAACCAA CAACGAAGTG GCGATTGAAA CGCTCGAAAT CGTCCACGAA
GGATACGAGC GCGTCCAGTA G
 
Protein sequence
MTDKDPLISA WFGVDFGDGV VGAFRECTGL GSENEVVESK ASGPDGKYII KKIPGRMKWN 
NVTLKRGITD AMDMWKWRKM VEEGDIQGAR RNGTITMFNT KGEPVARWKF VNAWPSKLTG
PDANATNNEV AIETLEIVHE GYERVQ