Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2820 |
Symbol | |
ID | 5540307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3658127 |
End bp | 3658555 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640894947 |
Product | phage tail protein |
Protein accession | YP_001432909 |
Protein GI | 156742780 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02241] conserved hypothetical phage tail region protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGA CGGAAGAAGC GTATCCTTCC TACCGATTCT ATGTCGAGAT TGCTGGCGTG CCGCATGCGG TGTTCACCGA AGTCAGCGGT TTGCAGGTCG AAACCGAGAT CACAGAATAC GAAGAGGGTG GCAACAACGA CTTTGTTCAC CGTTTGCCGG GTCGCACGAA GATTGGCAAT ATCACCCTCA AGCGCGGCAT GACCAGTTCG AATGAACTGT TGCAGTGGTT TCTCAAGATT GCGCGTGGCT CGATTGATCG GCGGAATGTG ACGGTCATCA TGTACGACTC GGCAGGGAAG GAATTGTTTC GCTGGAACTT CATCGAGGCG TATCCGATCA AATGGACCGG TCCGCAATTT ACTGCCGCCT CGACAGAAGC GGCGGTGGAA ACGCTCGAAC TGACGCACAA TGGAATGACG GTCGGGTAA
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Protein sequence | MPTTEEAYPS YRFYVEIAGV PHAVFTEVSG LQVETEITEY EEGGNNDFVH RLPGRTKIGN ITLKRGMTSS NELLQWFLKI ARGSIDRRNV TVIMYDSAGK ELFRWNFIEA YPIKWTGPQF TAASTEAAVE TLELTHNGMT VG
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