Gene Rcas_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2820 
Symbol 
ID5540307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3658127 
End bp3658555 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content54% 
IMG OID640894947 
Productphage tail protein 
Protein accessionYP_001432909 
Protein GI156742780 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGA CGGAAGAAGC GTATCCTTCC TACCGATTCT ATGTCGAGAT TGCTGGCGTG 
CCGCATGCGG TGTTCACCGA AGTCAGCGGT TTGCAGGTCG AAACCGAGAT CACAGAATAC
GAAGAGGGTG GCAACAACGA CTTTGTTCAC CGTTTGCCGG GTCGCACGAA GATTGGCAAT
ATCACCCTCA AGCGCGGCAT GACCAGTTCG AATGAACTGT TGCAGTGGTT TCTCAAGATT
GCGCGTGGCT CGATTGATCG GCGGAATGTG ACGGTCATCA TGTACGACTC GGCAGGGAAG
GAATTGTTTC GCTGGAACTT CATCGAGGCG TATCCGATCA AATGGACCGG TCCGCAATTT
ACTGCCGCCT CGACAGAAGC GGCGGTGGAA ACGCTCGAAC TGACGCACAA TGGAATGACG
GTCGGGTAA
 
Protein sequence
MPTTEEAYPS YRFYVEIAGV PHAVFTEVSG LQVETEITEY EEGGNNDFVH RLPGRTKIGN 
ITLKRGMTSS NELLQWFLKI ARGSIDRRNV TVIMYDSAGK ELFRWNFIEA YPIKWTGPQF
TAASTEAAVE TLELTHNGMT VG