| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2796 |
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| Symbol | |
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| ID | 5540283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3614095 |
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| End bp | 3615183 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894923 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001432885 |
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| Protein GI | 156742756 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA CCATTGTTTT CACCCGTGGC GTTCCGCCAA CCGACGCATT TCCGACGGCG
CAGATCGCTG AATGTCTGGC AACAGCAGTC GAGTCCGATG CAGCAGTTGT GCTCCAGTAC
GGTCAACAGC CCGGCTACGC GCCGCTGCGG GCGTTGCTCG CCGCCGAGTA TGGCGTCAAC
GACAATGAAA TCATGGTCGC CAACGGATCA TTGCAACTAC AAGACCTGCT GGCGGCGCAT
CTGGTTCGTC CCGGTGCGAC TGTCCTGACC GAGCAGCCGA GTTACGACCG GGCAATCACG
ACGTTTCGGC GTCGCGGCGC GCGCGTGGTC GGCATTCCGC TCGAAAGGGA CGGTCTCGAT
GTAACGCGCC TGGAAGCGGA GGTCAAACGC CAGACGCCAG CATTTCTCTA CACCGTGCCC
GACTTCCAGA ACCCGGCGGG CGTCACAACA TCGCTGGAAA AACGGCGCGC CATTCTGGAG
ATTGCCGACC GGTACGGTTT CTGGGTTATT GAAGATATTC CCTATCGCCT GCTCCGTTAC
CGCGGCGACA GTGTGCCAAT GATGCGCGCG ATCAATCCGG ATCGTGTGAT TACTATCACA
TCGTTCAGTA AACTCCTCAG CCCCGGCATG CGTGTTGGGT ACATGGTTGC GCCGTCGTCG
CTGGCGGCGG CGGTGACGAA GGAAGGTGAA AACACCTATC TGTCGCCGGT GCTGCCGACG
CAGGCGGCGG TTGCCGAATT CATCCGGCGT GGGTGGATGG CGCCGAACAT CGAGCGGTTG
AAGGAACTGT ACCGACCGCG TTGGGAGGCG ATGATGAGCG CCGTGCGTCG CTATCTGAAG
GGTGTCGTCG CTTCTGAGCC GGATGGCGGC TTCTTCGTGA GCGTGACCCT TCCGGCTGAC
GCCAACACTC GCAATCTTGT TGCGCGCGCG AAGGAGATCG GGTTGGTGCT GACCGAGGGG
CAGGCGTTCT TCGCCGATCC TGACGAGGGC CCGATGCCGG ATGGCGAACG TTTTGTGCGC
CTGCCGTTCT GTGCCGTAAC GCCGGAGCAG ATCGATGAAG GCATGCGTCG CCTGGCATCG
CTGCTCTAG
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| Protein sequence | MHDTIVFTRG VPPTDAFPTA QIAECLATAV ESDAAVVLQY GQQPGYAPLR ALLAAEYGVN
DNEIMVANGS LQLQDLLAAH LVRPGATVLT EQPSYDRAIT TFRRRGARVV GIPLERDGLD
VTRLEAEVKR QTPAFLYTVP DFQNPAGVTT SLEKRRAILE IADRYGFWVI EDIPYRLLRY
RGDSVPMMRA INPDRVITIT SFSKLLSPGM RVGYMVAPSS LAAAVTKEGE NTYLSPVLPT
QAAVAEFIRR GWMAPNIERL KELYRPRWEA MMSAVRRYLK GVVASEPDGG FFVSVTLPAD
ANTRNLVARA KEIGLVLTEG QAFFADPDEG PMPDGERFVR LPFCAVTPEQ IDEGMRRLAS
LL
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