| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2713 |
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| Symbol | |
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| ID | 5540199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3501846 |
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| End bp | 3502871 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894839 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001432802 |
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| Protein GI | 156742673 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC AAGCGCACGA TCGGCATATC CACGTGGTCG CTCTTGGCGG CGGCGGCGGC
GCTGTCCATG TGTTGCGTGC CGTTACGCCA TTCGCTGCAT CGCGCACGGC AGTGATCGCT
GTGACCGACA CCGGACGCTC GACCGGGCTG GCGCGGAAGA TCGGCACAAT GCCCGCTCCC
GGCGACCTGC GCGCGACCAT TGCGGCGTTC GCCGGCGATC AGGTAATGGC GGAGACGCTG
AATCATCGCT TCGATGGTGC AGGAATCCCC GCGCTGGAAG GGATGGCGTT CGGCAACCTG
TTGATCGCCG CACTGACTCG TGTGACCGGC GATTTCGCAA CTGCTATCGA GCATACAGCG
CGCCTCGCCG CCACAACGGT GCGGGTGTTG CCGGTAAGCG TCGCCAACGC GACGCTCTGT
GCGGAACTCA TTGATGGCAC GCGGGTCGAG GGGGAGTTCG AGGTGCGCGC GCTTGGCAAA
CCTCCGATTG CGCGCCTGTT CCTGCGCGAA CCGGCGGATG CCTATTCCCC GGCGCTCGAC
GCGATCCGCA ACGCCGACCT GGTGACGCTC GGTCCGGGAA GTCTCTGGAC GTCGGTGCTT
GCCTGCGTCC AGTTCGCTGG CATCGCAGAG GCGCTCGCCG ATTGCCGCGG AACGGTGGCA
TATATCTGCA ACTCAACGAC GCAACCGGGA CAGACGGATG GCTATCGTTG CATCGACCAT
GTGCAGCGGA TCGTCGAGGC GCTGGGTCAA GGTACGCTCG ATGTGGCGCT GATCAATCGC
AGCGACCCCG ATCCGGCGGC GATTCGTTCG TATGCGGAAG AGGGGCTGCA CCTGCTGCGC
CCCGACGATG ACGAAATTGT CGCTATCCAG GCGCTTGGCG TGACGCCGCT GGTGCGTGAA
CTGACCGAAG CAGTGGGACC GCGACGCGCG CTGTGGAACA AGCAGGATAC GATTCAGTAT
GATGCTGAAG CGCTACGCGC AGCGCTCTAT GAGATTGTCA TCATGAAAGG TAACCATCAT
GGCTGA
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| Protein sequence | MDRQAHDRHI HVVALGGGGG AVHVLRAVTP FAASRTAVIA VTDTGRSTGL ARKIGTMPAP
GDLRATIAAF AGDQVMAETL NHRFDGAGIP ALEGMAFGNL LIAALTRVTG DFATAIEHTA
RLAATTVRVL PVSVANATLC AELIDGTRVE GEFEVRALGK PPIARLFLRE PADAYSPALD
AIRNADLVTL GPGSLWTSVL ACVQFAGIAE ALADCRGTVA YICNSTTQPG QTDGYRCIDH
VQRIVEALGQ GTLDVALINR SDPDPAAIRS YAEEGLHLLR PDDDEIVAIQ ALGVTPLVRE
LTEAVGPRRA LWNKQDTIQY DAEALRAALY EIVIMKGNHH G
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