| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2628 |
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| Symbol | |
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| ID | 5540110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3389004 |
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| End bp | 3390314 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894752 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001432719 |
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| Protein GI | 156742590 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.879984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACT GGTCTCGCTC GCAACAACTC CTCGAACGCG CGCGGCGCGT GCTGCCGGCC
GGCGTCGCCA GCAATGTGCG CGCTGCCGAG CGTCCATTTC CGCTCTTCTT CACACAGGCG
GAAGGCGCCA TTCTCACCGA TGTCGATGGC AATCCATACA TCGACTATGT GCTGGGTCAG
GGTCCGCTGC TCCTGGGGCA TTCGCATCCT GCCGTGCTCG CGGCTGTCGA ACAGGCGATG
CGTCGGGGGC AACTGTTCGC CGGGCAGCAC GAACTCGAAA TCGAGGTCGC CGAGACGCTG
GTGCGCCTGA TCCCGTGCGC CGGGATGTGT CGCTTCGGCA TGAGCGGCTC GGAACTGGTG
CAGGCAGCAA TGCGTCTGGC GCGCGCAGTC ACCGGGCGCC GGCGCATCCT GCGTTTCGAG
GGGCACTACC ACGGTTGGTT CGATAATGTG CTCCTCAGCG TCGCTCCCCC ACCAGAACAG
GCTGGTCCGC GCGAATGCCC GCGCCTTGTT CCAGGGAGCG CCGGACAGAC GCCCGGCGTA
CAAGAGGATG CGCTCGTTCT GCCATGGAAC GACCTGACGC TGGCGGAGCG CCTCTTTGCC
GAACGCGGGC GCGAGATCGC CGCAGTGTTG ACCGAACCAA TGATGTGCAA CACCGGCGCC
ATTCCGCCCA CACCCGGCTT TCTGGAAGGC TTACGGCGGC TCTGCGATCA GTATGGCGTC
CTGCTCATCA TGGACGAAGT CATTACCGGC TTCCGGCTGG GGCTGTCTGG CGCGCAGGGG
CGCTTCGGCG TCACCCCCGA TCTGGCAGTC TTCGCCAAGG CGATGGGCGG CGGGTTTGCT
GTGGCGGCGC TCGTCGGACG GCGCGATTAT ATGGAACGCT TTGCGCGCGA TGTCAATCAT
TCGGGCACCT TCAACGGGAA TGTGGTGTCG ATGGCGGCGG CGGCGGCGGC GCTCGCGGAG
TTGGAGCGTG ATAACGGCGC CGTGTATCGC CACATTGAGG CGTTGGGGAC CATGCTAATG
GATGGAATCC GCGCCCTGGC GCATCGCCGT GATCTTCCGG TGCTCGTTCA GGGATTTCCG
GCAGCGTTTC ACGTGGCGTT TACCGAACTC AGCGCCATCC GCGAATACCG CGACTATGCG
TTGCACTGCG ATAAGGAGCG CTATGGGCGC TTCAAGGTTG CACTGCTCCA ACGCGGGGTG
CGCGTGCTCG ACCGCGGTAT CTGGTACCTC TCGGCGGCGC ACACTCAGGA GCAGATCGAG
CAGACCCTCG ATGCTGTCGA TGCGGCGTTG GCGGAGGTGC AGACGCTATG A
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| Protein sequence | MIDWSRSQQL LERARRVLPA GVASNVRAAE RPFPLFFTQA EGAILTDVDG NPYIDYVLGQ
GPLLLGHSHP AVLAAVEQAM RRGQLFAGQH ELEIEVAETL VRLIPCAGMC RFGMSGSELV
QAAMRLARAV TGRRRILRFE GHYHGWFDNV LLSVAPPPEQ AGPRECPRLV PGSAGQTPGV
QEDALVLPWN DLTLAERLFA ERGREIAAVL TEPMMCNTGA IPPTPGFLEG LRRLCDQYGV
LLIMDEVITG FRLGLSGAQG RFGVTPDLAV FAKAMGGGFA VAALVGRRDY MERFARDVNH
SGTFNGNVVS MAAAAAALAE LERDNGAVYR HIEALGTMLM DGIRALAHRR DLPVLVQGFP
AAFHVAFTEL SAIREYRDYA LHCDKERYGR FKVALLQRGV RVLDRGIWYL SAAHTQEQIE
QTLDAVDAAL AEVQTL
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