Gene Rcas_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2606 
Symbol 
ID5540088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3367301 
End bp3368134 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content59% 
IMG OID640894730 
Productmetallophosphoesterase 
Protein accessionYP_001432697 
Protein GI156742568 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCT ATTATCTGAA CAAGGACGTT CAGACTATGC GCATTATTGT GACAGCCGAT 
CTCCACTACC GTCCGGCGAA GCGCGACTCT TACCTGGCGT TTGCCGAATG GGTGCGGCAA
CGCAACCCCG ACTGCTTCAT CATTGCCGGC GACATCGGTC ATCCGCTCCG CCTCTTCCGG
CGCGGGCTGC AACTCTTCCG CGATCTGACC TGCACGCGCG CCGTGATCGC CGGAAACCAT
GATGTCTACC GCAGCGACCA CGACAGTCGC TCGCTCTGGG AGTCCTGGCT ACCGCAGATT
GCGCGTGAGG AAGGGTTCAT CTGGCTCGAA AACGATGTGC TGACGCTCGG AACGCTCGGC
ATCTGCGGCA CCATGGCGTG GTACGACTAT TCATCGCGCG CGCCGCATCT TGCGCTGGGC
GATCATGAGT ACCGCGTATT GAAGGGAAGC GTGAATCATG ACGCCGATTA TATCGATTGG
CCCTGGAGTG ATCGCGCTAT GGCGCGCTAT CTGGCGAAAG GGTTCGCCAA TCGTCTGGAG
ACGCTCATCG GCAATCCAGA TGTTTCCCAG ATTCTGGTTG TGACCCATGT GCCGATTATT
GAAGCGGCAG TGCCGCGCGA TCCTGAGAAT GATTTCTGGA GCCTGATGAG CGCCTACCTT
GGGAATCTCA CCCTGGGGAA GTTCGTGCTC GACCAGCCCA AGGTGAGCCA TATCGTCAGC
GGTCACCTGC ACCGCGCCGG TCGATGGACC ATTTCGGGGC GTCATGGTCC CGTCGAGTGC
CATGTTGTTG GCAGCCGCCC CGGCGAGCCA ACAGCGGTCG AGTTGAACTT TTAG
 
Protein sequence
MHIYYLNKDV QTMRIIVTAD LHYRPAKRDS YLAFAEWVRQ RNPDCFIIAG DIGHPLRLFR 
RGLQLFRDLT CTRAVIAGNH DVYRSDHDSR SLWESWLPQI AREEGFIWLE NDVLTLGTLG
ICGTMAWYDY SSRAPHLALG DHEYRVLKGS VNHDADYIDW PWSDRAMARY LAKGFANRLE
TLIGNPDVSQ ILVVTHVPII EAAVPRDPEN DFWSLMSAYL GNLTLGKFVL DQPKVSHIVS
GHLHRAGRWT ISGRHGPVEC HVVGSRPGEP TAVELNF