Gene Rcas_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2558 
Symbol 
ID5540040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3301074 
End bp3301493 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content59% 
IMG OID640894687 
Productmolecular chaperone (small heat shock protein)-like protein 
Protein accessionYP_001432654 
Protein GI156742525 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0128754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCG ACGATAATCC CCATGCCTCG ATACGCATTT TGCGCACGCG CATGCCGTAT 
GCGCCATTTG ATATGCGTCC GTGGTCGCCA GCGGTGAATG TGTTTGAGAC CGAACAGGCA
ATGCTGCTGG TCATCGAACT GGCCGGCGTC GAGCCTTCGA ATGTGCAGAT CGAAGCGCAC
CCGCAGTTTG TGCGTATCGC CGGCGTGCGC CAGATTGCGT TGCCCCACGA TCTGCGCCGC
TTGCACCGGA TGGAGATCGC ATCCGGCGCC TTCCAAATCG AGGTTCCTTT TGATCGCCCG
ATTGACCCGG ATCGGACGAC TGCCCGTTTC AACACCGGCT TGCTGGAAAT CTGGCTTCCT
TTCGCCGGGC GCGGCGCTCG TCAGGTTGTT GTCCACATTA AGCAGGAGGG TGAGTCATGA
 
Protein sequence
MIFDDNPHAS IRILRTRMPY APFDMRPWSP AVNVFETEQA MLLVIELAGV EPSNVQIEAH 
PQFVRIAGVR QIALPHDLRR LHRMEIASGA FQIEVPFDRP IDPDRTTARF NTGLLEIWLP
FAGRGARQVV VHIKQEGES