| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2528 |
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| Symbol | |
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| ID | 5540010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3261406 |
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| End bp | 3262059 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894659 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432626 |
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| Protein GI | 156742497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00802547 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGATC TACTATTAGA CGCCTACCAG TACTTCCTCG CCAATCAATC CCGTTTCTGG
ACTGCTGCAA CCCAACATCT GTGGATCAGC TCGGCGGCGC TGGCGATCAG CATCGCTGCC
GGGTTGCCTC TTGGCATCTG GACGGCGCAC GAGGCACGCA TCGGGCAGTG GACGATCAAC
CTGTTCGGCG CACTTCGTCT GGCGCCGAGT CTCGCTGTGC TGTTCCTGGT GCAACCCTAC
CTCGGCATCG GCACGATGCC GGCGCTTGTC GCGCTGACGC TCCTGGCGGT GCCGCCGGTG
CTCATTGCCA CATATGCCGG AATACGCGCA GTGGATCGCG GCGTGAGCGA AGCGGCGCGC
GGCATGGGAA TGACCGCCGG ACAAATCCTC TGGCGCGTAG AACTCCCGCT GGCGCTGCCG
TCGATAGTCG GCGGTGTGCG CACCGCAGCG GTCGAGGTGA TCGCAAGCGC CACGTTAGCC
GCCTTCATCG GCGGAGGCGG GCTTGGCATC TTTATCACCC GTGGCTACGC TCTGTTCGAT
ACCCGCATCA TGCTTGTCGG CGCCATCCCG GTGGCGTTGC TGGCGCTCAT GGCAGAGTTG
TCGCTGGGGT GGATGCAACG GCGTCTGGCA TCCGGGCTGG ACGCTGCAAC GTAA
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| Protein sequence | MIDLLLDAYQ YFLANQSRFW TAATQHLWIS SAALAISIAA GLPLGIWTAH EARIGQWTIN
LFGALRLAPS LAVLFLVQPY LGIGTMPALV ALTLLAVPPV LIATYAGIRA VDRGVSEAAR
GMGMTAGQIL WRVELPLALP SIVGGVRTAA VEVIASATLA AFIGGGGLGI FITRGYALFD
TRIMLVGAIP VALLALMAEL SLGWMQRRLA SGLDAAT
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