Gene Rcas_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2518 
Symbol 
ID5540000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3247714 
End bp3249108 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content61% 
IMG OID640894649 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001432616 
Protein GI156742487 
COG category[L] Replication, recombination and repair 
COG ID[COG2189] Adenine specific DNA methylase Mod 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCG CCATATTGGG AGAACGCTCG CAAGCAATGG ACGGAATACC CATCGTTCAC 
CTGTCGCCGC CGGCTGGTCG GGCGTGGCTC ACATGGAACG GGAAGCGCCT GCCCACGCCG
CTCTCTGTGC CCCCTGCCGT CGAAATCGAA CGCTGCGGCG TCGGCGATAA TCTTCTGCTT
CACGGCGAGA ACCTTGCTGC GTTGGCGTGG CTACTCGCCA ACGGCTACCG ACGACGGATC
AACCTGATCT ACATCGATCC ACCGTTTGGC TCGGGCATCG ATCGCGCGCG GCGCGTCCGC
CTGCGCGGTC CTGGTCCGGC GCGCCTCATA CCGGCTGCCG AGGTTGAATA CTGCGACACA
TGGGATGACG ATGCCTATCT CCAGTTTATG TATGAGCGAC TGATTGCGCT GCGCGACCTG
CTCGCCGATG ACGGCTGCAT CTACCTGCAC TGCGACTTTC GCAAGGCGCA CCACCTCCGC
TGTTTGATGG ACGAAGTCTT TGGCGCTGAA CGGATGCTCA ACGAAATCAT CTGGTTCTAC
CCGCGCGGCG GCGACGGTGA ACGCCAGTTT AACCGCAAGC ATGACACCAT CCTGCTCTAC
GCCCGGGGTG ACCGCTGGAC GTTCAACTAT GACGCGGTGC TCATTCCCTA CACTCGTCGT
CAGATTGCTC GCTTTCGCCA GGAAGACGAA CGCGGACGCT ACTACTGGAA TGTCAATCCA
CGCGGCGAGC GCGTCAAAAC GTATTTGCGC AAACCGGGCA TTGGAGCTTA CGATGTCTGG
ACGATCCCGA TCGATGCCGC ACTGGTGCGC GACCTCGGCT ACCCGACTGC AAAACCGCTG
GCGCTGCTCG AGCGCATTAT TCGCGCTTCA TCTCGACCGG GCGATCTGGT GCTCGACTGC
TTCGCCGGGT CGGGAACGAC CGCAGTGGCG GCGCAGCATC TGGAACGCCG CTGGATTGCT
TGTGATGCAA ACCCTGGCGC CATTCAGGTT ACAGCGCGCC GTCTCCGCCA GGCAATCCTC
GAGCGCGCGC CGCTGTCCGT TGGATTTTCG ACGTGGCGGA TTGGTGATGC CGTGCCGGCG
CCACAGGGCG AGGCCGGTAT TCGAGTTCTG CATCGGAACG AACAGGTCAC CGTTGTTGTG
GAGGCGTACT CCAGTTCCGC GCTGGCAACC CTCTCCGGCG ATCCCTCCGA GTGGCGCCGC
ATCGTTGACG AAATCCTGAT CGATCCGATG TATGATGGCA CAGTGTTTCG CCCGGTCATC
ATAGATGCGC CGCTGCGCCG CAGTGCGCTT GTGCGCGGCG CGTACACCAT GGCGCGAGAA
GCCATCAGCG CATCCCTGGC GCTCAAAATT GTCGATATAA CTGGCGGCGA AGCGTTCACG
ATTGTGTCGA TCTGA
 
Protein sequence
MERAILGERS QAMDGIPIVH LSPPAGRAWL TWNGKRLPTP LSVPPAVEIE RCGVGDNLLL 
HGENLAALAW LLANGYRRRI NLIYIDPPFG SGIDRARRVR LRGPGPARLI PAAEVEYCDT
WDDDAYLQFM YERLIALRDL LADDGCIYLH CDFRKAHHLR CLMDEVFGAE RMLNEIIWFY
PRGGDGERQF NRKHDTILLY ARGDRWTFNY DAVLIPYTRR QIARFRQEDE RGRYYWNVNP
RGERVKTYLR KPGIGAYDVW TIPIDAALVR DLGYPTAKPL ALLERIIRAS SRPGDLVLDC
FAGSGTTAVA AQHLERRWIA CDANPGAIQV TARRLRQAIL ERAPLSVGFS TWRIGDAVPA
PQGEAGIRVL HRNEQVTVVV EAYSSSALAT LSGDPSEWRR IVDEILIDPM YDGTVFRPVI
IDAPLRRSAL VRGAYTMARE AISASLALKI VDITGGEAFT IVSI