| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2484 |
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| Symbol | |
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| ID | 5539965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3199448 |
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| End bp | 3200632 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894614 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001432582 |
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| Protein GI | 156742453 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTG TGTTCAAAAA TCGTCTCCTG CTCTCGATCA GCGCCGGTCA CTTTGCTGTT
GACGTGCTCA ATAGCGTCGT TCCTGTGCTG CTGGCGGCGC TGGCTGCGCC GCTCGCGCTG
AGCAATGCTC AGATCGGTCT GGCGTTGACG CTCCACATTT TTGCCGGTGC GCTGTCGCAA
CCACTCTTCG GTTGGCTGGC GGATCGCTTC AGCAATCGTC CGGCAGCGCT GGCCGGCGTG
GGGGTCGCCT GGATGGCCGT GTGCCTGGCG GCGATTTCCG TTTCGATGAA CTGGACATTG
ATCGTTCTGC TGGTCGGCTT GATGGCGCTG GGGTCCGGAC TCTTCCACCC GATTGGAACG
GCAAGCGCGG CGGCTTCCGC TCCTGCGCGC GCTGCTAGCG CAACCGCGAT CTTTTTCTTC
AGCGGGCAAT TGGGTCTGTC GCTGGGTCCG CTCCTTGGGG GCGCATTACT TGGCGTTACG
AATGGCGCAC TGCCGATCCT GGCACTGACG GCGCTGGCGC TCGTTCCTGC CGTTTTTCTG
TTTGCTGCGC CGCGACCGGT CATCCCGGTG GGTGGAACAA CGCGCGCCGC ACATGCGGCA
GTCCGTGTCG GGGTGGCAAT CCTGGCGGCG TTTGTTGTTC TGGTGGCGCT GCGTTCATCG
ATCCAGTCGG TGTTTATGTC GTTCCTGCCG AAACTCTTTG CCGATCGCGG GTGGGAACCG
GTTGCCTACG GTGCGATCGC GGGCATCTTT ATGTTCGCTG CCGCAATCGG CAATATCATC
GCCGGGGACA TCGCCGACCG CTTTGGCATG CGCGCTGCCA CTATCTGGCC CCTGCTCGTC
AGTGTTCCTG CCGGGCTGAC TTGCCTCTGG TCGCCCTCGC CGTTAACGGC TTTCATTGCC
TGCGGCGTCG CCGGTATGGT TATCGGTGGG CAGCATAGCG TGCTGGTGGT CCACGCGCAG
CGACTGTTGC CGGTGCGTCA GGGGTTTGCT GCCGGGTTGA TCCTGGGGTT CACCTTTGCG
ACCGGCGGTA TTGGTACGGC GCTGGTGGGG GCGCTGGCAG ACGTGGTAGG ATTGCTCCCT
GCGATGCAGG GCGCGGTTCT GCTTGCGCTC CCCGCTGCTG CCCTGGCACT CACGCTGCCT
GGGCGCGAGT CGGTAACGGC GGTGGCGGCA GCGGCTGAGG CTTAA
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| Protein sequence | MPSVFKNRLL LSISAGHFAV DVLNSVVPVL LAALAAPLAL SNAQIGLALT LHIFAGALSQ
PLFGWLADRF SNRPAALAGV GVAWMAVCLA AISVSMNWTL IVLLVGLMAL GSGLFHPIGT
ASAAASAPAR AASATAIFFF SGQLGLSLGP LLGGALLGVT NGALPILALT ALALVPAVFL
FAAPRPVIPV GGTTRAAHAA VRVGVAILAA FVVLVALRSS IQSVFMSFLP KLFADRGWEP
VAYGAIAGIF MFAAAIGNII AGDIADRFGM RAATIWPLLV SVPAGLTCLW SPSPLTAFIA
CGVAGMVIGG QHSVLVVHAQ RLLPVRQGFA AGLILGFTFA TGGIGTALVG ALADVVGLLP
AMQGAVLLAL PAAALALTLP GRESVTAVAA AAEA
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