| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2459 |
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| Symbol | |
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| ID | 5539940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3159676 |
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| End bp | 3160554 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894589 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001432557 |
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| Protein GI | 156742428 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0140499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG ATCTTTCCCG TCTGAGCCTG AATCAGGCGA CGACCAAATA CTGGACGCTG
TGCGACGCGA TTGACGGTTG CGCTCGCGCG GGAATCCCTG CCATCGGCGT CTGGCGTGAC
CGTCTCGCGG AAGCCGGGGT CGCTGCCGCA GCGCGGATGC TGCGTGATGC GGGATTGCAC
TGTTCCAGCC TGTGCCGTGG CGGATGGTTT CCGGCTGCCA CCCGCGCTGA ACGCGCAGCA
CGTATTGATG ACAATCGCCG CGCCATCGAA GAAGCGGCAG CGTTGGGCGC CGATGTGTTG
GTGCTGGTAT GCGGACCGGC GCCGGACCGC GACATTCGCG CAGCGCGCGC TATGGTCGAG
GAGGGGATTG CCGCCATTCT GCCGGATGCC ATCGATCATG GCGTGACCCT GGGGATTGAG
CCGCTGCACC CCATGTTCGC CGCCGATCGG TCGGTGATTA CCAGCCTGGG AGAAGCCGTC
GCACTCGCAG AACGCTTTGA CTCGCCGCGC GTGGGGGTGG TGATCGACGC ATACCACGTC
TGGTGGGATG CAGGCGTGTA CGATCTTATT CAGCGGTGTG GACGGCGCAC CGTCGCTTAT
CACGTGTCCG ACTGGATCGT GCCGTTGCCG GATGTGCTGA ATGGGCGCGG CATGATGGGT
GATGGCGTGA TCGAATTGCG CTCGCTGCGC GAAGCGGTCG ATGCCGCCGG ATACCGTGGG
TTTATTGAGG TCGAAATCTT TAACGAAGCG ATCTGGAATA TGCCCGGCGA TCAGGTCGTA
TCATTGATGT GCGAACGCTA CCTTGAGCAC GTCGCGCCGA TCCAGGACCA ATACCCTTCA
AAGAAGCGCA CACCGGCGAT CAAAGACGCC TCGCCTTGA
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| Protein sequence | MPADLSRLSL NQATTKYWTL CDAIDGCARA GIPAIGVWRD RLAEAGVAAA ARMLRDAGLH
CSSLCRGGWF PAATRAERAA RIDDNRRAIE EAAALGADVL VLVCGPAPDR DIRAARAMVE
EGIAAILPDA IDHGVTLGIE PLHPMFAADR SVITSLGEAV ALAERFDSPR VGVVIDAYHV
WWDAGVYDLI QRCGRRTVAY HVSDWIVPLP DVLNGRGMMG DGVIELRSLR EAVDAAGYRG
FIEVEIFNEA IWNMPGDQVV SLMCERYLEH VAPIQDQYPS KKRTPAIKDA SP
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