Gene Rcas_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2374 
Symbol 
ID5539855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3061383 
End bp3061874 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID640894506 
Producthypothetical protein 
Protein accessionYP_001432474 
Protein GI156742345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.348169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.388231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAGCA TTCGTATCAT CCATGCCGTA TTCACCTTTG GGATCGGATT GTTTGCCGGA 
CTGCTCTACA CCTTTGAGCA GGGAGTGATT CCCGCGCTGA TGACGCTGAC CGCCGCCGAA
TACACGAAAG TGGAGCAGGG GCTGATCCGC GCGCTGGACG CCTTCCCCAC CGGCGTCATT
GTGGTGGCGA GTCTGTCGAT GTTGCTGCCG CTCTACCCGC TGGTGCGCTT ATGGAAGGAG
CGTCACACCC TGTATTGGCG GCTGACGGCA TTGGGGTGGG CGCTCTTCTT CTTTGGCGTG
GGAGTATTCA CCATCGTGCT CAATGTGCCG ATCAACAACG CGGTGCTGAC CTGGGATCCC
GCCGCCCCGC CCGCGGACTG GGCAAACGCG CGCGCGGCAT GGAACAGTCT GAACGCGATT
CGGACGCCGA TCAACTACCT GAGTTTTCTG CTCGTGATCT GGGCGGCTTT TGAAGCGCCG
AAGCAACCAT AA
 
Protein sequence
MRSIRIIHAV FTFGIGLFAG LLYTFEQGVI PALMTLTAAE YTKVEQGLIR ALDAFPTGVI 
VVASLSMLLP LYPLVRLWKE RHTLYWRLTA LGWALFFFGV GVFTIVLNVP INNAVLTWDP
AAPPADWANA RAAWNSLNAI RTPINYLSFL LVIWAAFEAP KQP