| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2323 |
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| Symbol | |
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| ID | 5539804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2994260 |
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| End bp | 2995309 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894456 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001432424 |
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| Protein GI | 156742295 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.199034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATT CCCCTTTGCA CCTCGGCGTG CCTGAGCAGC GGTTGAACGA ACCGGCTGCG
ACGACGCGCA CGATGCCGAC CGGTTTGGGA GACATCCTTC GTCGCGCCGA CCTGCTCAAC
GATATGGCGG ACGTTGAGCG CCAGATGCTG GCGCGCACCA TTTCGCGCGC TCCGCTGCTG
ACGGCTGCCG GCACGTACAC CGTCGCCGCT GGCGGCAAGC GGTTGCGCGC CGCCCTCGTG
CTGCTCTGCG CGCGGCTTGG GATGTACGAC CCGAGTCGGG CATTGCATCC GGCGATTGCC
ATCGAACTCC TGCATGCCGC CTCGTTGATC CACGACGATC TGGTCGATCA CGCCGGGCAA
CGTCGCGGGC ATGTCACGGT CCACTCGCGC TGGGACGCCG ACGTTGCGTT GTTGCTGGGC
GATTATTTCT TCGCGCTGGC GGCGAACGAA CTGGCCGCCG AGCCCGACCC GCGGATCATC
GCATTTTACA CGTCGGCGGC GCAGACGATG GTCGAAGGGG AACTGAATCC GGTGACCCAG
ATCGAGCCGC TGGCGATTGC GGTGGAACAG TACTACCGCA AGATTGGCTG CAAGACAGCC
GTGCTGTTCG AGGCGGCGTG CAAAGCGGGA ATCGCCGTTG CCGGCGGAGA CGATGCCCAG
ATCGAGACGC TGGGTCGTTT CGGCTACGAC CTGGGGCTGG CATTCCAGAT CGTCGATGAT
GTGCTCGACT ATACTGGCGA CGAAACGGCG CTCGGCAAGC CGGCCGGCAA CGACTTGCGC
GAGGGAACGC TGACGCTGCC ACTGATGTAT GCCGTGGCGC AGAGTCGTCA TCCGCTCCTG
CTCGCCATTG CCAATGGGCA ACGACCAGAA CCGGCGCGCG TGCCGCAGAT TGTGGCGGCG
GTCATTGCCA GCGGCGGCGC CGACCGCGCG ATGGAAGAGG CGCGCAGGTT GATCGAACGC
GCCAATCAGC AACTGACGCT GTTTGCGCCA ACACCGGCGC GCCGCGCTCT GATCGAGATC
GGCGAATTCG TCCTCAATCG ACGGATGTGA
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| Protein sequence | MAHSPLHLGV PEQRLNEPAA TTRTMPTGLG DILRRADLLN DMADVERQML ARTISRAPLL
TAAGTYTVAA GGKRLRAALV LLCARLGMYD PSRALHPAIA IELLHAASLI HDDLVDHAGQ
RRGHVTVHSR WDADVALLLG DYFFALAANE LAAEPDPRII AFYTSAAQTM VEGELNPVTQ
IEPLAIAVEQ YYRKIGCKTA VLFEAACKAG IAVAGGDDAQ IETLGRFGYD LGLAFQIVDD
VLDYTGDETA LGKPAGNDLR EGTLTLPLMY AVAQSRHPLL LAIANGQRPE PARVPQIVAA
VIASGGADRA MEEARRLIER ANQQLTLFAP TPARRALIEI GEFVLNRRM
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