| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2260 |
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| Symbol | |
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| ID | 5539741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2911208 |
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| End bp | 2912254 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640894393 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001432361 |
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| Protein GI | 156742232 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00259667 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTGCG TTCTGATCGG TCTCTGCGTT GTGTTCCTGA TTGCCTGTGC GTCCCCTGCG
CCTGATGCCA CGCCAACCTC TGTGGCGCCG GCGCCGGTCG CGCCGCCGTT TGCACCACCC
GGTGTTTCCC AACCGACGAT GATTGCCGCC GGTGCGCGGC TGCCTGGTCG CCTGCTCTTC
GCGCGCGACG GGAATGTCTG GCTGTGGCAG GATCAGGCTG GTCGCCTGTT GACCGGCGCC
GGTGCAGCGT CGCATCCCGC CTGGTCGCCC GATGGCGCGC GCATCGTCTT CGTGCAGCGC
GACCAGAGTT TTAGCGATTT GATGGCGCTG CCGCTGGACG GCGGCGCGCC GCTGCGTCTG
ACCGATAACG GCTCCAACCA ACCACGCAAT AGTTTCGAGC GCATCCGTGA GAGTATCTGG
GCATTTTATC CCTCGTTTGC GCCCGATGGC CAGACGATTG CCTTTGCGTC GCAATACGCC
CCACCCTCCG GTGCGCCGGC GGCGGAGTAC CACCTGGCGC TGTTCAGCAT GCCGGCGCAG
GCCGGTGGGG CGCGCCGGTT GATCTATGCC GACGATGCAG GGCACGTCGG GCGGGTCACG
CATGCTCCCG ACGGGTCGGC GATTGTGTTT GTGCTCGAAC CGGCAACGAC CGGTGGCGTA
TCGCAGATTC TGCGCTACGA CCGCGCAACC GGCGCCGTGA CCCCGCAGCC CGGCATCCCG
CCGCAGAGTT ACGATCCGGC GTTCTCACCC GATGGACGCT GGCTGGCGTT TGCCGGGCGT
GATGGTGACC GCACCGACAT TTTTGCGATA CCGACAGCTG GCGGAACCAT TGTGCGTCTG
ACAAGCATCG GTACGGCGCG CGCCCCCGCA TTCTCGCCCG ATGGACGGAT GATCGCGTTC
CTGGCGGTTG CACCCGCTGA GATCGGCTTC GATCTGTGGG TTGCAGACCT CCGCATGATC
GGTGATAGCC TGCAAGCGTC CACGCCGCGA CAGGTCAGCA TCGGATTGCG CGCCGACGCC
GACTCCGGTT TGAGTTGGGG GAAGTAG
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| Protein sequence | MRCVLIGLCV VFLIACASPA PDATPTSVAP APVAPPFAPP GVSQPTMIAA GARLPGRLLF
ARDGNVWLWQ DQAGRLLTGA GAASHPAWSP DGARIVFVQR DQSFSDLMAL PLDGGAPLRL
TDNGSNQPRN SFERIRESIW AFYPSFAPDG QTIAFASQYA PPSGAPAAEY HLALFSMPAQ
AGGARRLIYA DDAGHVGRVT HAPDGSAIVF VLEPATTGGV SQILRYDRAT GAVTPQPGIP
PQSYDPAFSP DGRWLAFAGR DGDRTDIFAI PTAGGTIVRL TSIGTARAPA FSPDGRMIAF
LAVAPAEIGF DLWVADLRMI GDSLQASTPR QVSIGLRADA DSGLSWGK
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