| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2204 |
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| Symbol | nadE |
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| ID | 5539685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2845959 |
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| End bp | 2848037 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894337 |
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| Product | NAD synthetase |
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| Protein accession | YP_001432305 |
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| Protein GI | 156742176 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0171] NAD synthase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0453723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.881972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT TCAACTCGAT CTACACCCAT GGCTTCATCC GCGCTGCGGT CTGCATTCCA
TCCCTGCGCG TCGCCACCCC AGAGCACAAT GTAGCGCGCA CGCTGGCGCT CGCAGAGCGC
GCCAGCGCCA CCAACGCCGC TGTCGCCCTC TTCCCTGAAC TCGGTCTTTC GGCATATACC
TGCGACGACC TGTTTCAGCA GGATGCCCTG CTCGAAGGCG TGCTCAACGC CCTGGAGCGT
CTCGTCGACG CCAGCCGCGC CCTGACGCCG GTATTGCTGG TCGGTGCGCC GCTGCGCATC
GATAGCGGAT TGTACAATTG CGCGGTCGTT ATCTACCGTG GGCGCATCCT GGGAATCGTG
CCGAAGAGTT ACATTCCGAA CTACCGCGAA TTCTATGAAA AACGACAGTT CAGCGCCGCG
CGCGACGCCA TCCGGCAGAC GGTCAGGCTG GCAGGCGATA CCGTACCATT TGGCGCCGAC
CTGATCTTCA CGGCGGAAAA CATCCCCGGC TTCACGCTGC ACGTCGAGAT ATGCGAAGAT
GTGTGGGTTC CTGCGCCGCC GAGCACCTTT GCCGCACTGG CAGGCGCGAC CATTCTTGCC
AACCTTTCCG CCAGCAACAT CACCATCGGC AAGGCGGACT ACCGCCGTAT GCTGTGCGCC
GCTCAATCCG GCGTCTGCCT GGCTGCCTAC CTCTATTCCG CCGCCGGTCC CGGCGAGTCG
ACCACCGATC TGGCGTGGGA TGGGCATGCA CTGATCTACG AACTCGGCGA GTTGCTGGCA
GAAAGCGAAC GCTTTGCGCG CGATGAGCAG ATCATCACGG CCGACATCGA TATTGAGCGG
ATTGTGCAGG AACGGATTCG CACCACTAGT TTCGCCGACT CGTCCGGCGA TCACCGCGAG
CGTTTACGCG CCATGCGGCG CATTCCATTT ACGTTCGAGA CGCCAACCGG CGACGTGCCG
CTGCAACGCA CTATTGCCCG CTTCCCCTAC GTGCCGGCCG ATCCGGTGCG CCGCGATGAA
CGCTGCTACG AAGCGTACAG TATTCAAGTC CACGGACTGA TGAAGCGTCT GGTCAGCACT
GGCATCGAGA AGGTCGTGAT TGGCGTATCC GGCGGACTGG ACTCAACGCA GGCGTTGATC
GTCGCCGCGC GCACTATGGA TCGGCTCGAC CTGCCGCGCA CCAATATTCT CGCCTATACC
ATGCCAGGAT TTGCCACCAG CGAGACCACG CTGACCAACG CACGCAATCT GATGCGCGCG
CTCGGCGTCA GCGCCGGCGA AATCGATATT CGACCGTCGT GTATGCAGAT GCTCCGCGAC
ATAGGGCACC CGTTTGCGCG CGGCGAACCG GTGTACGATG TGACGTTCGA GAATGTGCAG
GCGGGTGATC GCGCGTCGCA CCTCTTCCGC CTGGCAAATA TGCACGGCGC GCTCGTCGTC
GGCACCGGCG ACCTGAGCGA ACTGGCGCTC GGCTGGGCAA CCTACGGCGT CGGCGATCAC
ATGTCACACT ACAATGTCAA CGCCTCGGCG CCAAAGACCC TCATTCAACA TCTCATTCGC
TGGGTCGCCG ATTCCGGGCA GTTCGACGAC GCAACCAGCG CCATTCTGCG CTCCATCCTG
AGCACCGAGA TTTCCCCCGA ACTGGTGCCG CCTGACGGCG CAGATCATTC GCGTCCTGCG
CAAAGCACCC AGGCGATTAT CGGTCCTTAC GAGTTGCAGG ACTTCAACCT CTTCTACATC
ACACGTTACG GCTTTCGACC CAGCAAAGTC GCATTTCTGG CGTGGAACGC CTGGAGCGAC
GCGACGCGCG GCGAGTGGCC CCCCGGATTG CCCGGCGATG ATCGTCGCCA GTATGATCTG
GCGACGATCC GGCGCTGGCT TGAGGTTTTT CTGTGGCGCT TCTTCAAAAT CAGTCAGTTC
AAGCGCTCGG CGCTGCCAAA CGGTCCGAAG ATCGGCTCCG GCGGTTCGCT CTCGCCGCGC
GGCGACTGGC GCGCCCCAAG CGACGCCGAA GCCGATGTGT GGCTCGATGA ACTGCGCCGC
AATGTGCCGG AAAACCTCGT CGGCTCATGC GGATCGTAG
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| Protein sequence | MPAFNSIYTH GFIRAAVCIP SLRVATPEHN VARTLALAER ASATNAAVAL FPELGLSAYT
CDDLFQQDAL LEGVLNALER LVDASRALTP VLLVGAPLRI DSGLYNCAVV IYRGRILGIV
PKSYIPNYRE FYEKRQFSAA RDAIRQTVRL AGDTVPFGAD LIFTAENIPG FTLHVEICED
VWVPAPPSTF AALAGATILA NLSASNITIG KADYRRMLCA AQSGVCLAAY LYSAAGPGES
TTDLAWDGHA LIYELGELLA ESERFARDEQ IITADIDIER IVQERIRTTS FADSSGDHRE
RLRAMRRIPF TFETPTGDVP LQRTIARFPY VPADPVRRDE RCYEAYSIQV HGLMKRLVST
GIEKVVIGVS GGLDSTQALI VAARTMDRLD LPRTNILAYT MPGFATSETT LTNARNLMRA
LGVSAGEIDI RPSCMQMLRD IGHPFARGEP VYDVTFENVQ AGDRASHLFR LANMHGALVV
GTGDLSELAL GWATYGVGDH MSHYNVNASA PKTLIQHLIR WVADSGQFDD ATSAILRSIL
STEISPELVP PDGADHSRPA QSTQAIIGPY ELQDFNLFYI TRYGFRPSKV AFLAWNAWSD
ATRGEWPPGL PGDDRRQYDL ATIRRWLEVF LWRFFKISQF KRSALPNGPK IGSGGSLSPR
GDWRAPSDAE ADVWLDELRR NVPENLVGSC GS
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