Gene Rcas_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2122 
Symbol 
ID5539602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2726262 
End bp2726963 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID640894256 
Producthypothetical protein 
Protein accessionYP_001432225 
Protein GI156742096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.745735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATG AATTTGAAGT GTGCTGGGGA CCATCTCAGT GCAAAACGGT CGTTCGCGCA 
CCATATCAAA CGATTAGTGA AGTTATCGAA ACCTTAGTCG TCCAACTGAA CCTGCCACGT
TATGATGCGC GAGAGCAACG TATTGAGTAT GGTCTGTATC GGGACCGTGA GGAGAAACGG
GAACGCATTC AAGACACGCA AACGCTGGCG CAGGCGCGGA TTCGTGCTGG CCGTGTCTAC
ATTGCTAATG TTACAGCGCC CTGGTGGCAG ACCAAGGCGA CCGAGACGCC GCCGCAGAAA
TCTGGCACCG ATCGGTTGCC CCGCCGTAAA TTGCCGGTTA CGCCGTCGCG ATCATACGTC
TGTCGGCTTC AACTGGCGCC GAACTGTGTT GTCGTCGTGC AGGGAGATTA CCTGGAACTG
AACCGCAACT ATCTGTCGGA AAAACTTCCG TCAGCGATGG TTCTTGCGGA GAAAGCGCGT
GTCTTCAGTG GGTACAACTC GCGCTTGATG CATGTCAGTC GTACCCGCCA TTGTGATCTT
TTTCGACAGC ACGAACAGTG GTACATTCGC GCTCACAAGC CAACCTATGT CAATGGTCAG
GTGCTCAATC ATGGACAGAC GTCTGTTATT CAGCCGCCAG GAACGACGAT TGTTCTCGGG
CAAGGCGGGT GGAGCGTCAC CGTTGAACTG ATTGAGCAGT AG
 
Protein sequence
MEYEFEVCWG PSQCKTVVRA PYQTISEVIE TLVVQLNLPR YDAREQRIEY GLYRDREEKR 
ERIQDTQTLA QARIRAGRVY IANVTAPWWQ TKATETPPQK SGTDRLPRRK LPVTPSRSYV
CRLQLAPNCV VVVQGDYLEL NRNYLSEKLP SAMVLAEKAR VFSGYNSRLM HVSRTRHCDL
FRQHEQWYIR AHKPTYVNGQ VLNHGQTSVI QPPGTTIVLG QGGWSVTVEL IEQ