Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2122 |
Symbol | |
ID | 5539602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2726262 |
End bp | 2726963 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640894256 |
Product | hypothetical protein |
Protein accession | YP_001432225 |
Protein GI | 156742096 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.745735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATG AATTTGAAGT GTGCTGGGGA CCATCTCAGT GCAAAACGGT CGTTCGCGCA CCATATCAAA CGATTAGTGA AGTTATCGAA ACCTTAGTCG TCCAACTGAA CCTGCCACGT TATGATGCGC GAGAGCAACG TATTGAGTAT GGTCTGTATC GGGACCGTGA GGAGAAACGG GAACGCATTC AAGACACGCA AACGCTGGCG CAGGCGCGGA TTCGTGCTGG CCGTGTCTAC ATTGCTAATG TTACAGCGCC CTGGTGGCAG ACCAAGGCGA CCGAGACGCC GCCGCAGAAA TCTGGCACCG ATCGGTTGCC CCGCCGTAAA TTGCCGGTTA CGCCGTCGCG ATCATACGTC TGTCGGCTTC AACTGGCGCC GAACTGTGTT GTCGTCGTGC AGGGAGATTA CCTGGAACTG AACCGCAACT ATCTGTCGGA AAAACTTCCG TCAGCGATGG TTCTTGCGGA GAAAGCGCGT GTCTTCAGTG GGTACAACTC GCGCTTGATG CATGTCAGTC GTACCCGCCA TTGTGATCTT TTTCGACAGC ACGAACAGTG GTACATTCGC GCTCACAAGC CAACCTATGT CAATGGTCAG GTGCTCAATC ATGGACAGAC GTCTGTTATT CAGCCGCCAG GAACGACGAT TGTTCTCGGG CAAGGCGGGT GGAGCGTCAC CGTTGAACTG ATTGAGCAGT AG
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Protein sequence | MEYEFEVCWG PSQCKTVVRA PYQTISEVIE TLVVQLNLPR YDAREQRIEY GLYRDREEKR ERIQDTQTLA QARIRAGRVY IANVTAPWWQ TKATETPPQK SGTDRLPRRK LPVTPSRSYV CRLQLAPNCV VVVQGDYLEL NRNYLSEKLP SAMVLAEKAR VFSGYNSRLM HVSRTRHCDL FRQHEQWYIR AHKPTYVNGQ VLNHGQTSVI QPPGTTIVLG QGGWSVTVEL IEQ
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