| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2099 |
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| Symbol | |
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| ID | 5539579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2695720 |
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| End bp | 2697342 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894234 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
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| Protein accession | YP_001432203 |
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| Protein GI | 156742074 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCC AGATCACCGA TATTCCGCGG ATTCTGCCGG AGTTGATGCT CCTGCTGCTG
GGGCTGCTGG TGCTCGGCTC CGATGTTCTG ACACGCTGGG GACGCGGACC TGCGGCACAA
CTCGAACGCG CCAGAGAAGC CGGTCAACTG ACCGCCGTCG GTTTGGGACT GGTTTTTATT
GTCGGGCTGG TGCAAAGCCG CTTCCTGTTT ACCGTCCCTG ATCCGGCTGG CGGACCGCTG
GATGTGCTGT TGACGCTGGG GCGCAACTTG CAGACTGGCG GACCTGGCGG TTCACCGATC
CTAGGCGCGT TTGCGACCGA CGAATTCACG ATGATTGCGC GCCTGACCTT TATTGGCGCC
GCATTCTTGA CAACTCTGCT GGCGATGGGG TATCGGTTGA CCGCCAACCC CGGTGAGTTC
TATGCACTGC TGATCTTTTC GACACTGGGG ATGTCGATTA TGGCAGCGGC GACGGAGTTC
ATTCTGGCGT ACCTGGCGCT GGAGTTGTCA TCGCTTTCGC TCTATGTGCT CGCCGGATAC
TTCCGTGAAA GTGAACGTTC ACCGGAAGCA GGGCTGAAAT ATTTCCTGTT TGGCTCACTT
TCATCGGCAA TCTTCCTCTA TGGCATCAGC CTGACCTATG GGTTCGTCGC CAGTGAGAAC
CAGAAGGCGG GTGGCGCCCC GATCATCGCT ACGCTTTTTT CGGAGGTCGG GCGCTTCGCA
ACCGGCGATG CCGCCGGCAG CCCGTTGCTG ATCCTGGGCA TGCTCTTTAT CATTGCCGGT
TTGGGATATA AGATTTCGGT TGTGCCATTC CACACCTGGG CGCCGGATGT TTATCAGGGC
GCGCCGCCGC CCGTCACTGC CTTCCTCTCG ACAGCGTCGA AGGCAGCGGG GTTCCTGCTC
CTCTACCGAT TGCTGACGAC GGCGTTTCCG GGAGCAGTTG GTGCGCCACG CCTGGAAGAG
TTCAACGGCT GGACGAGTAT CCTGGCGATC CTGGCGCTGG TGACTGTGAT CGTCGGGAAT
CTGGCGGCGC TGCCACAGAC GAATGCGCGC CGCCTTCTGG CGTACTCGTC GATTGGGCAT
GCCGGATTCC TGCTGCTGGC GGTACTGCTC TGGGCATCGG CTTCGCCGGT GGATCGCACC
TTTGGCACGG CTGCTCTGAT CTATTACCTG ATAGTCTACT CGCTCACGAA CCTGGGGAGT
TTTGGCGTGC TGGCGGTGTT GACCAATGCA CTGGGCAGCG ACGACCTGAG CGCGATGCAG
GGGCTGTGGC GACGCAATAT GTCGTTGACC CTGATGATGA CGATCCTGAT CCTGTCGCTT
GCCGGGATTC CGCCGCTTGC CGGGTTCTGG GCGAAGTTCT TCGTGTTCAT GGCCGGCTAC
CAGGCGGGCG CCGTGCCGCT GGTGACCATC GCCGTGATTA TGACGGTCGT CAGTCTGTAC
TACTATCTGC GCTTTCTCAA AGCCATGTGG ATCTTGCCGG CGCCCGCAAT CACACCGTTC
AAGACGCCAC CGGTCGCCAA TGCCGCGATC ATTCTTTCGA CGGTGCTGGT GGTGCTGCTC
GGATTGCTGC CGAACCTGAT CTGGGGAACA ATCAGCAGCG CAGCAAGCGT TGCCGCGCGG
TAG
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| Protein sequence | MSFQITDIPR ILPELMLLLL GLLVLGSDVL TRWGRGPAAQ LERAREAGQL TAVGLGLVFI
VGLVQSRFLF TVPDPAGGPL DVLLTLGRNL QTGGPGGSPI LGAFATDEFT MIARLTFIGA
AFLTTLLAMG YRLTANPGEF YALLIFSTLG MSIMAAATEF ILAYLALELS SLSLYVLAGY
FRESERSPEA GLKYFLFGSL SSAIFLYGIS LTYGFVASEN QKAGGAPIIA TLFSEVGRFA
TGDAAGSPLL ILGMLFIIAG LGYKISVVPF HTWAPDVYQG APPPVTAFLS TASKAAGFLL
LYRLLTTAFP GAVGAPRLEE FNGWTSILAI LALVTVIVGN LAALPQTNAR RLLAYSSIGH
AGFLLLAVLL WASASPVDRT FGTAALIYYL IVYSLTNLGS FGVLAVLTNA LGSDDLSAMQ
GLWRRNMSLT LMMTILILSL AGIPPLAGFW AKFFVFMAGY QAGAVPLVTI AVIMTVVSLY
YYLRFLKAMW ILPAPAITPF KTPPVANAAI ILSTVLVVLL GLLPNLIWGT ISSAASVAAR
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