| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2096 |
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| Symbol | |
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| ID | 5539576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2689201 |
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| End bp | 2691381 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894231 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_001432200 |
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| Protein GI | 156742071 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGGT TCCTCCAGAA CGCCTGGCTG ATCCCGCTAC TGCCGCTGAT CGGGTTCGTC
GTCATTACTC TGACGCCGAT CCAGCGCAAC AGGAACGCGA GCGCCTGGCT GGCAACGCTG
TTGATGGTCG GTGCAACGAT CATTGCACTC GGCACAACTG TCGAAGTCGC CGGTGGCGTG
AAGATCGCGG CGGACGGCGC GGTTGCCGCG CACACGGAAG AGGGGCATGC CATTGAACCC
GCTGCCGACA AAGGCGCCGG GCACGGATTC GAGTGGCGTG ATCCGAATAT TGTCCGCACC
ATTCGTTGGG CGCCGGCTGG CGGCGACGTG TCCTTCACGA TGGGGTATAT CATCGACCCG
GCAGTAGCGG CGATGCTGGT GATGGTCACG ATCACCGCCA CCTGCATTCA TCTGTTCTCG
GTCGGCTACA TGGCGCACGA TCCGCGCCAG GCGCGCTTCT TCTCGTTCAT CTCGCTCTTT
ACTGCCGCGA TGCTGGCGAT GGTCATGGCG AGCAACCTGC TCCTCTTCTT TATGGCGTGG
GAGATTATGG GTCTGTGCTC ATACCTGTTG ATCGGCTTCT GGTACGATAA GAATTACGCC
GACCCAAACC AGATCACCCC GCGCCAGGCG GCGATCAAGG CGTTTATCAC CACACGCATC
GGTGATGTGC TCTTCATGAT TGGTCTGGCA TGGCTATGGA CTGAAGCCGG AACCCTCGAA
CTCGGCACAG GACCAGGGCA GGTGTTCAAT CCCGCACTGC TCGAACGCCT GGCGGCAACG
ACAACCGGCA TCGGGATCAG CGCCGCCACC GGCATTGCGC TGTTGATCTT CAGCGGCACG
ATCGGGAAAT CGGCGCAGTT CCCGCTCCAC GTCTGGCTCC CCGATGCGAT GGAGGGTCCG
ACGCCGGTTT CCGCCCTCAT CCACGCTGCC ACGATGGTGT CGGCGGGTGT GTTCCTGACG
GCGCGCACCT TCCCGATCTT CCAGGTCGGC GATGCCCTGC CGGTGGTGGC GACGATTGGC
GCGTTTACGG CGCTCTTCGC CGCGCTGATC GCCGTCGGGC AGTTCGATAT CAAGCGCATT
CTGGCGTATT CAACCCTCTC GCAGTTGGGG TTCATGGTTG CGGCGCTTGG CATTGGCGGA
TGGGTGGCGG CGATGTTCCA CCTGCTCACT CACGCCTTCT TCAAGGCGCT GCTGTTCCTC
GGCTCCGGCT CGGTCATCCA CGGCATGGAG GCGACGGTCG GGCATGACTC GAACACCGCT
CAGGACATTC GTAACATGGG CGGGTTGCGC CGCTTTATGC CGGTGACGTT CCTGGCGTAC
ATGGCGGGCT TCCTGGCGCT CGTCGGATTC CCTGGTTTTG CCGGGTTTTG GAGCAAGGAC
GAAATCCTGG CTGATGCGTT CCGCGCCAAT ACGCTGGTGT GGGGTGTGCT CAGTCTGGCG
TCGCTGCTGA CGGCGTTCTA TATGACGCGC CAGATCATGG TGGTGTTCTT TGGAACCTTC
CGCGGGCATC ATCCGCGGCA GCAGCCGTAT GCTTTTGTGT CGCACGACGA TCATCGCCAC
GAGGCGCACG ATCCGCACGA AAGCCCCTGG ACGATGACTG CGCCGCTGGT CATTCTGGCG
CTGTTCGCAG TGTTTGCCGG CGTGGTTAAC CTGCCGTTCG ATGGCTTCCA TCACCTGGCG
GATTTCTTCG GGCAGGAAGC CGGAAAACTG AACCTGCTGG TGATGGGGAT TTCCGGCGCG
ATTGCCATCG GTGGCATCGT TCTGGGATGG TTGGTGTACC GCAATGCGTT CGTATCTTCC
GCTGAGGAAG CCGACCCGCT GGAACGGATG ATGCCCGGCG TTTTCACCGT GCTCAACCGC
AAGTTCTATG TTGATGAACT GTACGCTGCG ACGGTCGGCG CCGCCGCCGC CGTGCTGACA
CGCATCTGGA CCTGGCTCGA CGAGCAGGTG ATCGACCGTG TGGTGATCGA AACCGGGCGC
TTTACCCGGT TCCTGGGACA GGTCAATTTC ATTTTGGACG ATGCGCTGCT GAACGATGGC
GCCGACCTGA TGGCAACCGG CACGCAGGTT GCCGGTGATC GCACCCGCCG CACAACGACC
GGTAAGGTGC AGGATTATGT GGCGCTGGCG TTCGCCGGGG CGGTCGTGCT CGGCGTCCTG
TACCTGTACC TGGTGCGTTG A
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| Protein sequence | MGWFLQNAWL IPLLPLIGFV VITLTPIQRN RNASAWLATL LMVGATIIAL GTTVEVAGGV
KIAADGAVAA HTEEGHAIEP AADKGAGHGF EWRDPNIVRT IRWAPAGGDV SFTMGYIIDP
AVAAMLVMVT ITATCIHLFS VGYMAHDPRQ ARFFSFISLF TAAMLAMVMA SNLLLFFMAW
EIMGLCSYLL IGFWYDKNYA DPNQITPRQA AIKAFITTRI GDVLFMIGLA WLWTEAGTLE
LGTGPGQVFN PALLERLAAT TTGIGISAAT GIALLIFSGT IGKSAQFPLH VWLPDAMEGP
TPVSALIHAA TMVSAGVFLT ARTFPIFQVG DALPVVATIG AFTALFAALI AVGQFDIKRI
LAYSTLSQLG FMVAALGIGG WVAAMFHLLT HAFFKALLFL GSGSVIHGME ATVGHDSNTA
QDIRNMGGLR RFMPVTFLAY MAGFLALVGF PGFAGFWSKD EILADAFRAN TLVWGVLSLA
SLLTAFYMTR QIMVVFFGTF RGHHPRQQPY AFVSHDDHRH EAHDPHESPW TMTAPLVILA
LFAVFAGVVN LPFDGFHHLA DFFGQEAGKL NLLVMGISGA IAIGGIVLGW LVYRNAFVSS
AEEADPLERM MPGVFTVLNR KFYVDELYAA TVGAAAAVLT RIWTWLDEQV IDRVVIETGR
FTRFLGQVNF ILDDALLNDG ADLMATGTQV AGDRTRRTTT GKVQDYVALA FAGAVVLGVL
YLYLVR
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