Gene Rcas_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2059 
Symbol 
ID5539539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2641145 
End bp2641612 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID640894195 
Producthypothetical protein 
Protein accessionYP_001432164 
Protein GI156742035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.535372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT ACAACATCAC CCTTTACGCA CACTCATATG TGCGATGGGC CGTTGTCATT 
CTTGGAGCGT TGCTCATTGT GCGCGCCCTG ACCGGCTGGC TGGGCAGGCG TTCGTGGGAT
GGTTCGGTTG AACGGTTAGG GTCGTTCTTT ACGATTTCGA TGGACATTCA ATTGTTGCTC
GGTCTGTTGC TCTATGGCGT CTTCAGCCCC ACAATGCAGC GCATCTTCAG CGATTTTGGC
AGCGCCATGG GTGATGCGCG ATTGCGCTTC TGGGCGGTTG AACATATGCT CATGATGGTG
GTCGCAGTAG TACTGGCACA CGTCGGGCAC GTCACTGCGA AGCGGATGCC GGAAGAGAAG
CGCTACCGGC GCTACGCGAT CTTTGCCGGT CTGGCGATGC TGGCGGTGTT GCTGGCAATA
CCGTGGCCCT TTAGCGGCGC CGATCCGCGC CCGCTCTTCC GGGTGTGA
 
Protein sequence
MNPYNITLYA HSYVRWAVVI LGALLIVRAL TGWLGRRSWD GSVERLGSFF TISMDIQLLL 
GLLLYGVFSP TMQRIFSDFG SAMGDARLRF WAVEHMLMMV VAVVLAHVGH VTAKRMPEEK
RYRRYAIFAG LAMLAVLLAI PWPFSGADPR PLFRV